Gene Xaut_1352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_1352 
Symbol 
ID5422001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp1553724 
End bp1555022 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content65% 
IMG OID640880600 
Productextracellular ligand-binding receptor 
Protein accessionYP_001416257 
Protein GI154245299 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.533055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTTC GTCGCCTCGT CGCGGCAGCG GGACTGTCGC TGCTCGGCCT TTGTCCCGCC 
CTGGCCCAGC AAAAGCCGGC CGAGCTGAAG ATCGGCATCA CCACCTACAG CTCGGGCGCG
GCGTCCGTCT TCGGCATCCC GGCCCGCGAC GCGGCGGAGA TGCTGGCCGC CGACATCAAC
GCCAAGGGTG GCGTCCAGGG CGTGCCGGTG AAGCTGTTCT TCGTGGATGA AGGCGCCGGC
ATCGAGACCC TCATGACCGA ATATCGCCGC CTGGTGGAGG ACACCAAGGT GGACGTGATG
TTCGCCTCCA TCTCCTCCGG CGTGTGCAAC AAGATCGCCC CGCTGGCCGA GGACCTGAAG
GTTCTCAACT TCATGTGGGA TTGCGGCACC CAGCGCATCC TCGAGGAAGA CAAGTACAAT
TACGTCTTCC GCACCCAGGC GAACGCGACC CCCGAGGTCC TCGCCCCGCT GCTCTATCTC
CTGAAGACCA AGCCGGACTT CAAGACCATT GCCGTGGTGA ACCAGGACTA TGCCTGGGGC
CGCGACAGCT GGGCCATCTT CTCCCAGGCG CTGAAGGTGC TGAAGCCCGA CGTGAAGGTG
GTGGCGGAAT TCTTCCCCAA GTTCGGCGCC GCCGACTTCT CCACCGAGGT CTCGCGCCTG
CTGGCGCTGA AGCCGGATGT GATCTTGTCC ACTTCCTGGG GCGGCGACCT CGACACCTTC
GTGCGGCAGG CCAACCAGCG CGGGCTGTTC AAGTCGTCCC TGTTTGTGCT GCCGCTGGCG
GAATCCTCGC TCCAGCGCCT CGGCACCGAC CTGCCTGAGG GGGTGATCGT GGGCGGCCGC
GGCGACCATT ATTTCCTTCA TCCCGAGCGC ATCGGCGACG CCAAGTTCAA GGCGTTCATG
GACGCCTTCA AGCAGAAGAC CGGCAGCTAT CCCATCTACC CGGTGTTCCA CATGGCGCAG
GCCTTCGCCG CCCTCGAAGC GGTCTATGGC AAGGCGGTGG CCGCCAACGG CGGCAAGTGG
CCGAGCCACG ACCAGGTCGC CAAGGCGATG CCCGGCCTCA CCTTCCAGGC CCTTGGCCGG
CCAGTGGAAA TCCGCGCCGA CGGGCAGGGC GTCGAGGACC AGCTCATCGG CACCACCACC
CGCGTGCCGG CCTACAGCTT CGACATCCTC GACAACATGA TGATCTTCCC CGCCGTGCAA
CTGATGCCGC CGGTGGGCCA GAAGTCCGAG GCCTGGATCG CAACGCTGAA GCCCGGCATC
GTCGACATCA AGGTCGACAC CTTCAAGGCG GCCAAATAG
 
Protein sequence
MLLRRLVAAA GLSLLGLCPA LAQQKPAELK IGITTYSSGA ASVFGIPARD AAEMLAADIN 
AKGGVQGVPV KLFFVDEGAG IETLMTEYRR LVEDTKVDVM FASISSGVCN KIAPLAEDLK
VLNFMWDCGT QRILEEDKYN YVFRTQANAT PEVLAPLLYL LKTKPDFKTI AVVNQDYAWG
RDSWAIFSQA LKVLKPDVKV VAEFFPKFGA ADFSTEVSRL LALKPDVILS TSWGGDLDTF
VRQANQRGLF KSSLFVLPLA ESSLQRLGTD LPEGVIVGGR GDHYFLHPER IGDAKFKAFM
DAFKQKTGSY PIYPVFHMAQ AFAALEAVYG KAVAANGGKW PSHDQVAKAM PGLTFQALGR
PVEIRADGQG VEDQLIGTTT RVPAYSFDIL DNMMIFPAVQ LMPPVGQKSE AWIATLKPGI
VDIKVDTFKA AK