Gene Xaut_1298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_1298 
Symbol 
ID5423277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp1495069 
End bp1496328 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content69% 
IMG OID640880546 
Productputative ABC branched-chain amino transporter, periplasmic binding protein 
Protein accessionYP_001416204 
Protein GI154245246 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCGCC TGACTGCCCC GCGCACCCCA CGCGCAGCGC TGCCCGCCTT CGCCCCGTCC 
CTCGCGCTCG CGCTCACCCT GACGGCCGCC ACGGCGCTGC TGCCCGCGCC TGCGCATGCC
CAGATCTCCG ACAATGTGGT GCGCATCGGC GTGCTCGGCG ACATGGGCGG GCAGTTCGCC
GACATCGGCG GCAAGGGCTC GGTGGTGGCG GCGCAGCTCG CCGTAGACGA TTTCGGCGGC
AAGGTCGCCG GCGCGCCGGT GGAGGTGATC GCCGGCGATC ACCAGAACAA GCCGGACGTG
GGCGGCGCCA CCCTGCGCAA ATGGTTCGAT GAGGGCGGCG TGGATGCGGT AGCCGACCTG
CCGGTCAGCT CGGTGGCCCT CGCCGCGCAG GAGATCGCGC GGGAGAAGAA GAAGACCCTG
CTCATCTCCG GCGCCGCCGT GTCGGACCTC ACCGGCAAGG CCTGCTCGCC TTATTCCACC
CACTGGGCGG ACGACACCTA TGCGCTGGCC AACGCCACCG GCCGCGCGGT GACAGCGGGC
GGCGGCAAGA GCTGGTTCTT CCTCACCGTG GATTATTCCT TCGGCCATGC CATGGAGCGC
GATGCCTCGG CGGCGGTGGT GGCCACCGGC GGCAAGGTGG TGGGCAATGC GCGCCATCCG
CTGGGGGCGG CGGACCTGTC CTCCTTCCTG CTGCAGGCCC AGTCCTCCAA GGCGCAAGTG
ATCGGCCTTG CCAATGTGGG CGGCGACACC AGCAATGCGG TGAAGCAGGC GGCCGAATTC
GGCATCACCT CCGGAGGGCA GAAGCTGGCG GGCTTCCTCG TCTTCCTCAC GGATGTGCAC
GCCATCGGCC TGCCGCTGGC CAAGGGGCTC ATGGTCTCCA CCGGCTTCTA CTGGGACCAG
AATGCCGAGG CGCGGGCCTT CGCCAAGCGT TTCGAGGCCA AGATGGGCCG CATGCCCACC
AAGCAGCAGG CCTCGGTCTA TGCCTCGGTG AAGCACTATC TGAAGGCGGT CGCCGCCGCC
GGCACCGATG ATGCCGCCAA GGTGAATGCC GAGATGCGCA GCCTGCCGGT GGACTATTTC
GGCCACGCCG CCTCCATCCG CCCCGACGGC CGCGTGCTCT ACGACCTCAC CCTCTATGAG
GTGAAGAGCC CGGCCGAGAG CAAGGGGCCG TGGGACTATT ACAAGCCGGT CACCACCCTG
CCCGCCGCCG AGGTGTTCCG CCCCGCCGGC GAGACCGGAT GCCCGCTGGG CAAGTCCTGA
 
Protein sequence
MHRLTAPRTP RAALPAFAPS LALALTLTAA TALLPAPAHA QISDNVVRIG VLGDMGGQFA 
DIGGKGSVVA AQLAVDDFGG KVAGAPVEVI AGDHQNKPDV GGATLRKWFD EGGVDAVADL
PVSSVALAAQ EIAREKKKTL LISGAAVSDL TGKACSPYST HWADDTYALA NATGRAVTAG
GGKSWFFLTV DYSFGHAMER DASAAVVATG GKVVGNARHP LGAADLSSFL LQAQSSKAQV
IGLANVGGDT SNAVKQAAEF GITSGGQKLA GFLVFLTDVH AIGLPLAKGL MVSTGFYWDQ
NAEARAFAKR FEAKMGRMPT KQQASVYASV KHYLKAVAAA GTDDAAKVNA EMRSLPVDYF
GHAASIRPDG RVLYDLTLYE VKSPAESKGP WDYYKPVTTL PAAEVFRPAG ETGCPLGKS