More than 300 homologs were found in PanDaTox collection
for query gene Xaut_1298 on replicon NC_009720
Organism: Xanthobacter autotrophicus Py2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009720  Xaut_1298  putative ABC branched-chain amino transporter, periplasmic binding protein  100 
 
 
419 aa  843    Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_1194  putative ABC branched-chain amino transporter, periplasmic binding protein  71.88 
 
 
405 aa  559  1e-158  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3789  Leu/Ile/Val-binding family protein  56.53 
 
 
409 aa  468  1.0000000000000001e-131  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.710609 
 
 
-
 
NC_011894  Mnod_1190  putative ABC branched-chain amino transporter, periplasmic binding protein  57.53 
 
 
401 aa  464  9.999999999999999e-131  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.402198  n/a   
 
 
-
 
NC_009717  Xaut_5024  extracellular ligand-binding receptor  57.22 
 
 
400 aa  452  1.0000000000000001e-126  Xanthobacter autotrophicus Py2  Bacteria  normal  0.151241  normal 
 
 
-
 
NC_010511  M446_2530  putative ABC branched-chain amino transporter, periplasmic binding protein  57.41 
 
 
402 aa  454  1.0000000000000001e-126  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3122  Extracellular ligand-binding receptor  53.73 
 
 
419 aa  447  1.0000000000000001e-124  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_1790  Leu/Ile/Val-binding family protein  55.17 
 
 
417 aa  446  1.0000000000000001e-124  Methylobacterium sp. 4-46  Bacteria  normal  0.322977  normal  0.0207356 
 
 
-
 
NC_011894  Mnod_3421  ABC transporter substrate-binding protein  56.46 
 
 
406 aa  445  1.0000000000000001e-124  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_1336  extracellular ligand-binding receptor  57.11 
 
 
400 aa  446  1.0000000000000001e-124  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.116449 
 
 
-
 
NC_011894  Mnod_0709  Leu/Ile/Val-binding family protein  55.47 
 
 
406 aa  444  1e-123  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.195015  n/a   
 
 
-
 
NC_011894  Mnod_7057  Extracellular ligand-binding receptor  52.51 
 
 
420 aa  444  1e-123  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_3279  Extracellular ligand-binding receptor  56.84 
 
 
400 aa  436  1e-121  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.463071  n/a   
 
 
-
 
NC_011004  Rpal_2487  Extracellular ligand-binding receptor  51.43 
 
 
404 aa  434  1e-120  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.589907  n/a   
 
 
-
 
NC_007336  Reut_C6432  extracellular ligand-binding receptor  57.07 
 
 
407 aa  434  1e-120  Ralstonia eutropha JMP134  Bacteria  hitchhiker  0.00470186  n/a   
 
 
-
 
NC_007348  Reut_B3887  ureA/short-chain amide ABC transporter  52.76 
 
 
413 aa  434  1e-120  Ralstonia eutropha JMP134  Bacteria  normal  0.0891482  n/a   
 
 
-
 
NC_007778  RPB_3199  extracellular ligand-binding receptor  50.5 
 
 
405 aa  434  1e-120  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.206752  normal  0.636131 
 
 
-
 
NC_009720  Xaut_1437  extracellular ligand-binding receptor  55.58 
 
 
401 aa  432  1e-120  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.694305 
 
 
-
 
NC_010511  M446_6250  ABC transporter substrate-binding protein  53.3 
 
 
413 aa  433  1e-120  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0435582 
 
 
-
 
NC_010524  Lcho_3593  putative ABC transporter substrate binding protein  54.35 
 
 
403 aa  433  1e-120  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.636574 
 
 
-
 
NC_011894  Mnod_2526  ABC transporter substrate-binding protein  55.47 
 
 
411 aa  431  1e-119  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.779779  n/a   
 
 
-
 
NC_009485  BBta_0682  putative branched chain amino acid binding protein  51.47 
 
 
395 aa  429  1e-119  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.246685  normal  0.442954 
 
 
-
 
NC_012858  Rleg_6729  Extracellular ligand-binding receptor  53.02 
 
 
401 aa  429  1e-119  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_2256  extracellular ligand-binding receptor  51.89 
 
 
403 aa  430  1e-119  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.777349  normal  0.277076 
 
 
-
 
NC_007973  Rmet_1640  putative UreA/short-chain amide ABC transporter  51.41 
 
 
412 aa  430  1e-119  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.000640664  normal 
 
 
-
 
NC_007778  RPB_4690  extracellular ligand-binding receptor  52.26 
 
 
397 aa  427  1e-118  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_1377  ABC transporter substrate-binding protein  51.77 
 
 
404 aa  427  1e-118  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6215  putative ABC branched-chain amino transporter, periplasmic binding protein  55.35 
 
 
403 aa  427  1e-118  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.947625  normal 
 
 
-
 
NC_011366  Rleg2_5823  putative branched-chain amino acid ABC transporter, substrate-binding protein  52.26 
 
 
401 aa  425  1e-118  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.281514  normal  0.102648 
 
 
-
 
NC_004311  BRA0953  branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative  52.37 
 
 
401 aa  422  1e-117  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5091  putative branched-chain amino acid ABC transporter, substrate-binding protein  51.6 
 
 
416 aa  424  1e-117  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.339692  normal  0.603773 
 
 
-
 
NC_009504  BOV_A0894  putative branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein  52.37 
 
 
401 aa  422  1e-117  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_3119  Extracellular ligand-binding receptor  52.23 
 
 
403 aa  424  1e-117  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.741733  n/a   
 
 
-
 
NC_009720  Xaut_4079  ABC-type branched-chain amino acid transport system, periplasmic component  52.14 
 
 
405 aa  421  1e-117  Xanthobacter autotrophicus Py2  Bacteria  normal  0.23084  normal 
 
 
-
 
NC_009636  Smed_2864  putative periplasmic binding ABC transporter protein  52.01 
 
 
401 aa  422  1e-117  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.581336 
 
 
-
 
NC_008782  Ajs_3849  putative UreA/short-chain amide ABC transporter  54.01 
 
 
392 aa  423  1e-117  Acidovorax sp. JS42  Bacteria  normal  0.375619  normal 
 
 
-
 
NC_007958  RPD_2475  ABC-type branched-chain amino acid transport systems, periplasmic component  54.86 
 
 
405 aa  422  1e-117  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.25109 
 
 
-
 
NC_007925  RPC_0074  putative branched chain amino acid periplasmic binding protein of ABC transporter  51.15 
 
 
399 aa  421  1e-116  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_1402  branched-chain amino acid ABC transporter, periplasmic amino acid- binding protein  51.85 
 
 
401 aa  418  1e-116  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_2953  ABC transporter substrate-binding protein  55.8 
 
 
408 aa  418  1e-116  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.137688  normal 
 
 
-
 
NC_010511  M446_5530  putative ABC branched-chain amino transporter, periplasmic binding protein  54.38 
 
 
401 aa  420  1e-116  Methylobacterium sp. 4-46  Bacteria  normal  0.460998  normal 
 
 
-
 
NC_009720  Xaut_1578  ABC transporter substrate-binding protein  52.99 
 
 
402 aa  420  1e-116  Xanthobacter autotrophicus Py2  Bacteria  normal  0.803505  normal 
 
 
-
 
NC_007964  Nham_1674  ABC transporter substrate-binding protein  54.07 
 
 
409 aa  421  1e-116  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_5300  putative periplasmic substrate binding protein  52.62 
 
 
397 aa  417  9.999999999999999e-116  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.401613  n/a   
 
 
-
 
NC_007958  RPD_4400  putative branched chain amino acid periplasmic binding protein of ABC transporter  52.88 
 
 
397 aa  418  9.999999999999999e-116  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6351  putative branched-chain amino acid ABC transporter, substrate-binding protein  52.76 
 
 
403 aa  413  1e-114  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.182816 
 
 
-
 
NC_010505  Mrad2831_1936  extracellular ligand-binding receptor  55.88 
 
 
409 aa  412  1e-114  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0141282 
 
 
-
 
NC_010505  Mrad2831_4022  extracellular ligand-binding receptor  52.51 
 
 
404 aa  413  1e-114  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.339015  normal  0.405471 
 
 
-
 
NC_009485  BBta_4670  putative ABC transporter, substrate-binding protein  50.88 
 
 
403 aa  413  1e-114  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_5117  putative UreA/short-chain amide ABC transporter  55.03 
 
 
404 aa  412  1e-114  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_3229  putative ABC branched-chain amino transporter, periplasmic binding protein  57.07 
 
 
412 aa  411  1e-113  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_2137  ABC branched-chain amino acid transporter, periplasmic ligand biinding protein  54.21 
 
 
404 aa  410  1e-113  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3615  urea/short-chain binding protein of ABC transporter  52.97 
 
 
404 aa  408  1e-113  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.489489  normal  0.574773 
 
 
-
 
NC_011891  A2cp1_1820  Extracellular ligand-binding receptor  54.47 
 
 
404 aa  411  1e-113  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011892  Mnod_8470  ABC-type branched-chain amino acid transport systems, periplasmic component  54.01 
 
 
411 aa  409  1e-113  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.481667  n/a   
 
 
-
 
NC_011004  Rpal_3503  putative ABC transporter, substrate binding protein  53.61 
 
 
408 aa  408  1e-113  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.10294  n/a   
 
 
-
 
NC_007958  RPD_2999  putative urea/short-chain binding protein of ABC transporter  53.73 
 
 
408 aa  409  1e-113  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0873398  normal  0.403324 
 
 
-
 
NC_011894  Mnod_3282  Extracellular ligand-binding receptor  55.17 
 
 
408 aa  409  1e-113  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0100489  n/a   
 
 
-
 
NC_011894  Mnod_0807  extracellular ligand-binding receptor  53.85 
 
 
402 aa  411  1e-113  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.329195  n/a   
 
 
-
 
NC_010511  M446_3023  putative UreA/short-chain amide ABC transporter  55.56 
 
 
406 aa  409  1e-113  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.040363 
 
 
-
 
NC_008686  Pden_1717  ABC branched-chain amino acid transporter, periplasmic binding protein  50.64 
 
 
399 aa  409  1e-113  Paracoccus denitrificans PD1222  Bacteria  normal  0.620152  normal 
 
 
-
 
NC_010623  Bphy_4932  extracellular ligand-binding receptor  50.26 
 
 
409 aa  406  1.0000000000000001e-112  Burkholderia phymatum STM815  Bacteria  normal  0.350034  normal 
 
 
-
 
NC_011004  Rpal_2079  branched chain amino acid transport system substrate binding protein  52.47 
 
 
404 aa  405  1.0000000000000001e-112  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1677  ABC branched-chain amino acid transporter, periplasmic ligand biinding protein  52.89 
 
 
404 aa  407  1.0000000000000001e-112  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc3342  putative substrate-binding periplasmic (PBP) ABC transporter protein  48.98 
 
 
402 aa  403  1e-111  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1152  UreA/short-chain amide ABC transporter  52.6 
 
 
415 aa  402  1e-111  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.471291  normal  0.323569 
 
 
-
 
NC_010505  Mrad2831_0057  extracellular ligand-binding receptor  51.98 
 
 
405 aa  404  1e-111  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.652717  normal 
 
 
-
 
NC_007778  RPB_2450  urea/short-chain binding protein of ABC transporter  52.96 
 
 
408 aa  404  1e-111  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.045034  normal  0.258523 
 
 
-
 
NC_007778  RPB_3877  urea/short-chain binding protein of ABC transporter  49.88 
 
 
406 aa  404  1e-111  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.188449  normal 
 
 
-
 
NC_009485  BBta_3779  putative ABC transporter, substrate binding protein  54.07 
 
 
408 aa  404  1e-111  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_3211  Extracellular ligand-binding receptor  50.13 
 
 
402 aa  404  1e-111  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1473  putative urea/short-chain binding protein of ABC transporter  50.26 
 
 
406 aa  404  1e-111  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.267716  normal 
 
 
-
 
NC_010505  Mrad2831_0329  putative ABC transport protein substrate-binding component  50.77 
 
 
405 aa  402  1e-111  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.42175  normal 
 
 
-
 
NC_009485  BBta_3757  ABC transporter substrate-binding protein  50.49 
 
 
409 aa  405  1e-111  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_4450  Extracellular ligand-binding receptor  56.35 
 
 
401 aa  405  1e-111  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.378958  n/a   
 
 
-
 
NC_010511  M446_1339  ABC transporter substrate binding protein  54.55 
 
 
412 aa  404  1e-111  Methylobacterium sp. 4-46  Bacteria  normal  0.358784  normal  0.213428 
 
 
-
 
NC_009050  Rsph17029_4029  ABC branched-chain amino acid transporter, periplasmic binding protein  50.4 
 
 
400 aa  398  9.999999999999999e-111  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A3369  extracellular ligand-binding receptor  49.87 
 
 
402 aa  399  9.999999999999999e-111  Ralstonia eutropha JMP134  Bacteria  normal  0.998438  n/a   
 
 
-
 
NC_007643  Rru_A3303  amide-urea binding protein  48.51 
 
 
404 aa  400  9.999999999999999e-111  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.219547  n/a   
 
 
-
 
NC_010682  Rpic_3537  putative substrate-binding periplasmic (PBP) ABC transporter protein  49.87 
 
 
402 aa  401  9.999999999999999e-111  Ralstonia pickettii 12J  Bacteria  normal  0.277166  normal  0.0827229 
 
 
-
 
NC_009720  Xaut_3348  extracellular ligand-binding receptor  53.05 
 
 
403 aa  400  9.999999999999999e-111  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.164921 
 
 
-
 
NC_007958  RPD_1254  ABC-type branched-chain amino acid transport systems, periplasmic component  52.67 
 
 
427 aa  398  9.999999999999999e-111  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.946675 
 
 
-
 
NC_007973  Rmet_3518  extracellular ligand-binding receptor  49.61 
 
 
402 aa  398  9.999999999999999e-111  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.36456 
 
 
-
 
NC_011894  Mnod_4449  Extracellular ligand-binding receptor  53.74 
 
 
416 aa  401  9.999999999999999e-111  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.29774  n/a   
 
 
-
 
NC_009076  BURPS1106A_4065  putative amino acid uptake ABC transporter, periplasmic amino acid-binding protein  50.92 
 
 
398 aa  397  1e-109  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2936  branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein  50.66 
 
 
398 aa  395  1e-109  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007336  Reut_C5957  extracellular ligand-binding receptor  48.98 
 
 
409 aa  397  1e-109  Ralstonia eutropha JMP134  Bacteria  normal  0.0908104  n/a   
 
 
-
 
NC_008782  Ajs_3119  extracellular ligand-binding receptor  50.51 
 
 
398 aa  397  1e-109  Acidovorax sp. JS42  Bacteria  normal  0.125075  normal 
 
 
-
 
NC_007434  BURPS1710b_0198  branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein  50.92 
 
 
398 aa  397  1e-109  Burkholderia pseudomallei 1710b  Bacteria  normal  0.352006  n/a   
 
 
-
 
NC_007494  RSP_3297  ABC branched-chain amino acid transporter, periplasmic binding protein  50.4 
 
 
400 aa  397  1e-109  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.300791  n/a   
 
 
-
 
NC_008836  BMA10229_A1607  putative amino acid uptake ABC transporter, periplasmic amino acid-binding protein  50.26 
 
 
392 aa  396  1e-109  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1850  putative ABC transporter, substrate binding protein  50 
 
 
402 aa  398  1e-109  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.164156  n/a   
 
 
-
 
NC_009074  BURPS668_3991  putative amino acid uptake ABC transporter, periplasmic amino acid-binding protein  50.92 
 
 
398 aa  397  1e-109  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1283  putative substrate-binding periplasmic (pbp) ABC transporter protein  51.2 
 
 
401 aa  395  1e-109  Acidovorax citrulli AAC00-1  Bacteria  normal  0.154147  normal 
 
 
-
 
NC_011992  Dtpsy_2465  Extracellular ligand-binding receptor  50.76 
 
 
398 aa  397  1e-109  Acidovorax ebreus TPSY  Bacteria  normal  0.357174  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3375  putative amino acid uptake ABC transporter, periplasmic amino acid-binding protein  50.66 
 
 
398 aa  395  1e-109  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1282  extracellular ligand-binding receptor  49.62 
 
 
406 aa  393  1e-108  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0780459  normal  0.651455 
 
 
-
 
NC_009379  Pnuc_0008  extracellular ligand-binding receptor  51.75 
 
 
400 aa  393  1e-108  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.0939525  n/a   
 
 
-
 
NC_008786  Veis_4075  ABC-type transporter, periplasmic component  49.25 
 
 
404 aa  392  1e-108  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.624367 
 
 
-
 
NC_008782  Ajs_3120  putative substrate-binding periplasmic (pbp) ABC transporter protein  50.51 
 
 
400 aa  394  1e-108  Acidovorax sp. JS42  Bacteria  normal  0.347887  normal 
 
 
-
 
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