Gene Xaut_1283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_1283 
Symbol 
ID5423785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp1476200 
End bp1476892 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content67% 
IMG OID640880531 
ProductTPR repeat-containing protein 
Protein accessionYP_001416189 
Protein GI154245231 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.873901 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCCAT CATCGAAAGG AAACCTTATG CGTGCCAACC CGCACACGCT GCTGCGTGCC 
ATGCTGCTCA CCGCCATCGC CCTCGGTGCC CCCGCCGCGC GAGCGGCCGA CGATGGCCTC
AATGCCCAGG TCAAGCAGAT CCAGACCCGG TGGGAGACCA TCAAGTTCAC GGTGCCGGAG
GGCGACAAGC AGACCGAGCA GATGAACGCC CTCGGCGCCG AAGCCGACGC CATGGCGGCC
AAATATCCGG ACCGGGTGGA GGCGCTGGTG TGGGACGGCA TCCTCACCAG CGAGCTCGCC
TCCATGGTCA ATCCCATCAG CGCCCTGTCG CTGGCCAAGC GAGCCCGCGA CACGCTGGAA
AAGGCCTATG GCATGAACCC CACGGCGCTG GACGCCGGCG CGCCCACCAG CCTCGGCGTG
CTCTATTATC GCGTGCCGGG CTTCCCGGTG GCGTTCGGCG ACAAGGTCAA GGCCCGCCAG
CTGCTGGAGG AGGCCACCCG CGACGCCCCC AACGGGCTCG ACGCCTGGTA TTTCTACGGC
GACTTCCTGC TGAGCCAGGG CGAATATGCC AAGGCCCGCG CGGCCTTCAC CCACGCCTTA
TCAATCCCGC CCCATGCCGA CCGGCCCCTG TGGGACGAGA ACCGACGCCT CGTGATCCAC
GAGAAGCTCG ACCAGATAAA GGCCAAGCAG TGA
 
Protein sequence
MPPSSKGNLM RANPHTLLRA MLLTAIALGA PAARAADDGL NAQVKQIQTR WETIKFTVPE 
GDKQTEQMNA LGAEADAMAA KYPDRVEALV WDGILTSELA SMVNPISALS LAKRARDTLE
KAYGMNPTAL DAGAPTSLGV LYYRVPGFPV AFGDKVKARQ LLEEATRDAP NGLDAWYFYG
DFLLSQGEYA KARAAFTHAL SIPPHADRPL WDENRRLVIH EKLDQIKAKQ