| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1025 |
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| Symbol | |
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| ID | 5421712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 1177546 |
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| End bp | 1178826 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640880272 |
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| Product | type III effector Hrp-dependent outers |
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| Protein accession | YP_001415933 |
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| Protein GI | 154244975 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02019] bacteriochlorophyll 4-vinyl reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTCG CCCTCGGCAC CATCGCCGAC GACTATACCG GCGCCTCCGA CCTCGCCAAC
ACCTTGGCCA AGAACGGCCT GCGCACCGTG CAGACCGTGG GCATCCCGGC CGACGACCTG
CCGCTGGGCG AGGTGGACGC GGTGGTGGTC TCCCTGAAGA TCCGCTCCGT GCCCGCCGCC
GAGGCGGTGG AGAAGGCCCG CGCCGCCGAC CGCTGGCTCA GGGCGCGCGG CGCCGGCCAT
GTCATGTACA AGATCTGCTC CACCTTCGAT TCCACCGACG AGGGCAATAT CGGCCCGGTG
CTCGACGCCC TCTCGGCGGA TGCCGGCGCG GCGGCGGTGC TGGTCACCCC CGCGTTTCCG
GAGACCGGGC GCACCGTCTA CCAGGGCCAT CTCTTCGTCG GCTCGGTGCC GCTGAACGAG
AGCCCGCTCA AGGACCATCC CCTCAATCCC ATGCATGACG CGAACCTCGT GCGCGTGCTG
GGGCGGCAGA GCGTCTCCCG CGTGGGGCTG GTTCCACAGG CGCTGGTGGC GCGCGGCGCG
GATGCCGTCC GCGCCCGGCT GGCGGAGCTT GCGGTCGACG GCATCGGCGG CGTGATCGCC
GACGCGGTGA ATGAGGGCGA TCTGGTCACC CTCGGCGCCG CAGCACTCGA TTCCCAGGTT
TCCGTGGGCG CCTCCGGCCT CGGCCTCGGC CTGGCCCGGG GCCTCGTCGC CACCGGCCGG
GTGCTGCGGG TCGATGCGAC GGCATCGGTC ATGGCCGGTG TCGGCGGGCT TTCCGCCTGC
CTTGCCGGTA GCTGCTCCAA GGCCACGCTG GAACAGATCG CGCGGGCCGA GGATGTCATG
CCAGTGCTGC GCCTGTCCGC CGAGGCGCTG GTCTCCGGCC CTGCCGAGGC CGAGGGGGCA
CTGGAGTGGG CAGCCGCCCG CATCGGCGAC GGTCCCGTCC TCATCGCCTC CTCTGCCTCG
CCGGCCGAGG TGGCACGGCT TCAGGCCCTC CACGGCCGCG AGGCTGCCGG CCATGCCATC
GAGCAGGGGC TGGCGACCAT TGCCGAAGGG CTGGTCAAGC GCGGCGTCCG TCGGCTGGTG
GTGGCGGGGG GCGAGACCTC CGGCGCGGTG GTGGATCGCC TGGGCATCCC AGCCTTCGCG
CTGGGACCGG AGATCGCCGC CGGCGTGCCG GTGCTGCGCA CCATCGGCGG CGCCCACGGT
GATCTTCTCA TGGCGCTCAA GTCCGGCAAT TTCGGCGGCG TGAACTTTTT CACCGATGCG
CTGGGGCTGA TGTCGAAGTA G
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| Protein sequence | MTLALGTIAD DYTGASDLAN TLAKNGLRTV QTVGIPADDL PLGEVDAVVV SLKIRSVPAA
EAVEKARAAD RWLRARGAGH VMYKICSTFD STDEGNIGPV LDALSADAGA AAVLVTPAFP
ETGRTVYQGH LFVGSVPLNE SPLKDHPLNP MHDANLVRVL GRQSVSRVGL VPQALVARGA
DAVRARLAEL AVDGIGGVIA DAVNEGDLVT LGAAALDSQV SVGASGLGLG LARGLVATGR
VLRVDATASV MAGVGGLSAC LAGSCSKATL EQIARAEDVM PVLRLSAEAL VSGPAEAEGA
LEWAAARIGD GPVLIASSAS PAEVARLQAL HGREAAGHAI EQGLATIAEG LVKRGVRRLV
VAGGETSGAV VDRLGIPAFA LGPEIAAGVP VLRTIGGAHG DLLMALKSGN FGGVNFFTDA
LGLMSK
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