| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0978 |
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| Symbol | |
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| ID | 5424306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 1094313 |
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| End bp | 1095056 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640880225 |
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| Product | haloacid dehalogenase, type II |
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| Protein accession | YP_001415886 |
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| Protein GI | 154244928 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAGG CTTTCGTATT CGACGCCTAC GGCACGCTCT TCGACGTGCA GTCCGTCGCC
GACGTGACGG AACAGGCGTT TCCCGGTCAT GGCGAGATCA TCACCCAGAT CTGGCGCATG
AAGCAGCTGG AATACAGCTG GCTGCGCTCG CTCATGGGCG ACTACCGCGA CTTCTGGACG
GTGACGCGGG AGGCGCTGAC CTACACGCTC GGCGTGCTCG GCCTCTCCCC CACCGCGACC
CTCTTCGACG ATATCGCCGA GGCCTATAAC CGCCTTGCGC CCTATCCGGA CGCAGTGGCG
GCCCTTGGCG GCCTGTCCGG CGTGCACCGC GCCATCCTGT CTAACGGCAG CCCGCAGATG
CTTGATCCGC TGGTGGGCGG CTCTGCCCTG CGCGACCTGA TCGAGACCAC CATCAGCGTG
GACGAAAAAC GCGCATTCAA GCCGGATCCG CGTGCCTACG AACTGGTGGA GGAGCGACTT
GGTGTGAAGC CGCACGAGGT GATCTTCGTC TCCTCGAACG GTTTCGACAT CGCCGGAGCC
AAGCGCTTCG GCTTCCGCGT CGCCCGCATC GCGCGCCTGC CCCAGGCTGC TTTGGCCCAG
GAGGTCGCCG AAGAGATGAC CGGCGCGCTG CGGCCGGTGA CCTTTTACAA GGCGCTGCGG
ACGCAGGAGG AAGCTCTGGG CTATGCGCCC GATTTCACGG TCTCCTCGCT CGCCGACCTG
TCGCGCCTCG CCGTCGCCGC CTGA
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| Protein sequence | MIKAFVFDAY GTLFDVQSVA DVTEQAFPGH GEIITQIWRM KQLEYSWLRS LMGDYRDFWT
VTREALTYTL GVLGLSPTAT LFDDIAEAYN RLAPYPDAVA ALGGLSGVHR AILSNGSPQM
LDPLVGGSAL RDLIETTISV DEKRAFKPDP RAYELVEERL GVKPHEVIFV SSNGFDIAGA
KRFGFRVARI ARLPQAALAQ EVAEEMTGAL RPVTFYKALR TQEEALGYAP DFTVSSLADL
SRLAVAA
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