Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_0776 |
Symbol | |
ID | 5420984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 860907 |
End bp | 864338 |
Gene Length | 3432 bp |
Protein Length | 1143 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640880018 |
Product | UvrD/REP helicase |
Protein accession | YP_001415684 |
Protein GI | 154244726 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.240899 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACGCCT TCGAGCCCAT CCGGTCCAAG GCCGCAGCGC TTCATGGCCA GCTGGTCTCG GAGGGGTGTG ACCCGTTTGA CCCGCTCGCG CTCGTTCTGG CCGCCGCCGC CAAGCTCGAT CTCCAGGTCG TCTGGCTTCC TGCCGGCGAT CCTGCACTGA AGGGCGCGCG GGCTCTGTAC GACGACCAAG GCGGCACCGT CTGTTGCGAG CAGGAGCCTG ATCCGGCGAC ACGTGCACTG TTGGTAGCAC ACGAAATCGG ACACGCCGAT CTGCATGCTG GATCGGCGGT GTGCGCCAGC GGCGACATCG ATCCGTCGAG AAGCACGGAG GCGGCGCCCG TCGGATTGCA GCGGGTGGAA GACTACGGCG CTCGCGAACG GCGCGAACTG CAAGCCAATG TCTATGCGCG CGAACTCGTC CTCCCGCGCG TAGTCGCGCG GGACCTGCAT GTCTCACGCG GGATGACGGC GAGCGCCATC GTCGATCGAA CGAAACTGTC CATGCCTCTG GTTCGCCAGC AGTTGTTCGA CGCGCTCCTC TTGCCGCCCT TGGGCGACAT TGAAAGCGAG CCGCCCGTCG GTGTCGTCGC GACGCCGAGG CACGACCCGT CACAAGATCG CGCTGCCGCA CACCGCGACA CACCGTTTCA GCTGCAGGCC GGCCCGGGCA CGGGCAAGAC GCGAACCTTG GTCAAGCGGG TGCTGTCGTT GCTGGCCGAC GGTATCGACC CGGCGGCCAT TCTTGTCCTG ACATTCTCCA ACCGCGCCGC CGGCGAACTC TCCGAGCGCC TGATTGCGGC CGCGCCGGAC GCGGCGCCTA AGCTCTGGAT CGGCACCTTC CACGCCTTCG GTTTGGATCT GGTCCGCCGC TACCATGACA AGCTCGGGCT AACGCCCAAC CCGGCGCTCT TCGACCGGAG CGACGCGATC GCGGTTCTCG AAGAAATTCT GCCGACCCTG CCGCTGGTCC ACTATCGCAA TCTCTGGGAT CCGGCGATGG TCCTGCGCGA CATCGTCGCG GCCATCTCGC GTGCCAAGGA CGAGCTCGCC GATCCGGCGC GCTATCGCGC GCTGGCGCAA GGCATGGCGG CCGAGGCCGT CGACGAGGAG GCGCGCATCG CAGCCGCGAA GTGTCTCGAG ATCGCCGACA TCTATGATCT CTACGAGCAG GCGCTGCGAA AGCACGGCGG CGTGGATTTC GGCGATCTGA TCATGCGCCC GGCGCGCCTC CTCGAAACGG ACGAAGCCAC GCGCATCGCG GTGCAGCTGC GGCACCGTCA CGTGCTCGTC GATGAATACC AGGACGTCAA TCGCGCCAGC GCCCGTCTCC TGAAGCTGGT CGCCGGCGAC GGCGAGCGGC TATGGGTGGT CGGCGACGCA CGGCAGTCGA TCTACCGGTT TCGCGGCGCC TCATCGGAGA ACATGGTGCG CTTCGGCCGG GACTATCCGG GCGCAGCGGT TGACCAGCTC GGCGTCAATT ATCGCTCGAC GGACCAGATT GTCCGCAGCT TCGTCGCCGT CGCACCGCGG ATGGGCGCCT CCCACGGCAT GCTGGCGCTG GCGCTCGAGG CGGACCGCGG CGCCGCGCCG AGCCGCCCTG AAATTTGCCG CTTCGAAACG CTTGACGATG AGGCCGCGGG CCTGGCGGCG AGCATCCGTG AGCTCGAAGG CGCAGGCGTG CGGCTGCGCG ATCAGGCCGT GCTCTGCCGC ACCAACGGAC GCCTCAATGA GATCGCCGCG GCGCTGGAAG CCCGCGGCAT TCCCATCCTC CATCTCGGGA GCCTCTTCGA GCGCGAAGAG GTCCGCGATC TGCTCTGCCT GCTGAGCCTG GCCGTCGATC CGTTTGGCGA CGCCATCGTG CGCGTCGGCG CGATGCCGCG CTACGGCCTC TCGCTGCAGG ATGCGTATTG CGTTTCCCGG CACCTGCGCT CAATCGGCAA GCCAGCGCTT GCCGGCCTCG CGGAGGCCTC GGCCGCGCCG GGCTTATCAA CAGCCGGGCG CGCGGGGGTC GAACGGCTGG CCGCAGACCT GGCCGGCCTG CGCGCGAACG CGAGCGCCTG GGATTTCCTG GCCACCTACC TGCTCGACCG GACGGACCTT GCAAAACAGC TTAGCCAGGC GGACAGCCTC ACCGCACAGA TGCGTGCGGT CGCCATCTGG CAATTCCTCA ACTTCGTCCG CGAACAAGTG CCGGTCGGCG GCGGCTTGCC GATCCAGCGG ACGCTGGACC GTGTGCGCCA GCTCGTCTTG CTGGCCGAGG AGCGCGATCT GCGCCAGGTC CCGGCCGCTG CGCTGCATCT GGATGCCGTG CGGCTGATGA CGGTGCACGG CAGCAAGGGC CTCGAGTTCG AGGCAGTCCA TATCCCCGGC CTGACGGTCG CAAGCTTTCC GAGTTCGAAT CGTGGTCAGC GTTGTCCGCC ACCGCGCGGC ATGGTCGAGG GTGCCGGCGA TCTTTCGCCC GCCGACGAGG CGAAGCGCGC GCATGACGAC GAAGAGGAGT GTCTCTTCTT CGTCGCGCTG TCGCGCGCCC GAACGCACCT GCGTCTCTAC CATGCGCGCA AGCAGCGCAA TGGGAGCGGT CGATCTGCCT CGCCCTTCTT AGGTTGGATA CCGGCGACCC TCCTGGACGA GATCTCGAAT CCACCGACTC TTCCGCTGCC GGCAGGCGCG TCCACGTCGC AGCCGATCGC GATCGCCTGG CCGGCCGACT GGTCCGTCAC GGACAGCCGT CTGGGGTCGT ATGAGAAGTG TCCGCGCCGG TTCTTCTACA CCCACGTTCT GGGCCTCGGC GGGGCGCGCA AGCCCACGGC CTTCTCGCGG ACCCATGACT GTCTCTACGA TCTGCTGCGG TGGCTTGCCG ATACGCGGCG CACGGCCGAG CCCACCGTCG CGGACGCGGA ATCCGCATTC GAGAAAATCT GGGGCACGCG GGGCCCGACG GATCACGCCT TTGCAGCGGA CTATCGCCGG CTCGCATCCC GCTTGATCGG AGCACTGGTC AGATCCGGAG CCGGACGGCG GTTTCGCGAG GCGCAGCCTC TTGCGATCGA TTTTCCCAAC GGGCGGGTGG TGGTGGAGCC GAACGAGCTC GCCGAGCTGC CCGATGGCAC GGTCGTCATT CGCCGGGTGC GGACCGGTCA CAAACGCAGC GACGAATATG ACCGGCTCGA ATACACGCTT TATCATCTTG CGGCGGAGAG CCAGTTCGGC GGTCGCGCGG TCGTTCAGGC GCTGCATCTG ACCGATGAAA CGGCGGAGGC CGTCGCCATC AGCGCTACCA AGCTCGGCAA CCGCAAGAAG AAGAGCGACG GGATGCTGGC CGGCATCGCC GGCGGCGCCT TCCCGACCGA GGTGGACGTC GTGACGTGCC CGCGCTGCCC GCACTTCTTC GTCTGCGCCG CGACGCCGCC AGGCCCCCTC ACGCTCGACT AG
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Protein sequence | MDAFEPIRSK AAALHGQLVS EGCDPFDPLA LVLAAAAKLD LQVVWLPAGD PALKGARALY DDQGGTVCCE QEPDPATRAL LVAHEIGHAD LHAGSAVCAS GDIDPSRSTE AAPVGLQRVE DYGARERREL QANVYARELV LPRVVARDLH VSRGMTASAI VDRTKLSMPL VRQQLFDALL LPPLGDIESE PPVGVVATPR HDPSQDRAAA HRDTPFQLQA GPGTGKTRTL VKRVLSLLAD GIDPAAILVL TFSNRAAGEL SERLIAAAPD AAPKLWIGTF HAFGLDLVRR YHDKLGLTPN PALFDRSDAI AVLEEILPTL PLVHYRNLWD PAMVLRDIVA AISRAKDELA DPARYRALAQ GMAAEAVDEE ARIAAAKCLE IADIYDLYEQ ALRKHGGVDF GDLIMRPARL LETDEATRIA VQLRHRHVLV DEYQDVNRAS ARLLKLVAGD GERLWVVGDA RQSIYRFRGA SSENMVRFGR DYPGAAVDQL GVNYRSTDQI VRSFVAVAPR MGASHGMLAL ALEADRGAAP SRPEICRFET LDDEAAGLAA SIRELEGAGV RLRDQAVLCR TNGRLNEIAA ALEARGIPIL HLGSLFEREE VRDLLCLLSL AVDPFGDAIV RVGAMPRYGL SLQDAYCVSR HLRSIGKPAL AGLAEASAAP GLSTAGRAGV ERLAADLAGL RANASAWDFL ATYLLDRTDL AKQLSQADSL TAQMRAVAIW QFLNFVREQV PVGGGLPIQR TLDRVRQLVL LAEERDLRQV PAAALHLDAV RLMTVHGSKG LEFEAVHIPG LTVASFPSSN RGQRCPPPRG MVEGAGDLSP ADEAKRAHDD EEECLFFVAL SRARTHLRLY HARKQRNGSG RSASPFLGWI PATLLDEISN PPTLPLPAGA STSQPIAIAW PADWSVTDSR LGSYEKCPRR FFYTHVLGLG GARKPTAFSR THDCLYDLLR WLADTRRTAE PTVADAESAF EKIWGTRGPT DHAFAADYRR LASRLIGALV RSGAGRRFRE AQPLAIDFPN GRVVVEPNEL AELPDGTVVI RRVRTGHKRS DEYDRLEYTL YHLAAESQFG GRAVVQALHL TDETAEAVAI SATKLGNRKK KSDGMLAGIA GGAFPTEVDV VTCPRCPHFF VCAATPPGPL TLD
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