| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0680 |
|---|
| Symbol | |
|---|
| ID | 5422599 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 765582 |
|---|
| End bp | 769085 |
|---|
| Gene Length | 3504 bp |
|---|
| Protein Length | 1167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640879923 |
|---|
| Product | helicase domain-containing protein |
|---|
| Protein accession | YP_001415589 |
|---|
| Protein GI | 154244631 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.272356 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGGCGA GACTCGAAGA TATCAAAAAC GGCGCGTCAG TCCGCGGCAT TGCGTCCGCG
CAGCCGGTTC AGGTTGTGTC CGTCGACTGG ATCGGCGACC AAGCCATTAG CGTCGTCTTC
CGCGATCACA GTGGAACCGT TGCCGAATCC ATTCTCTATC GAGACGACGA ACACCGGCTC
GAAGTCGAGA AAACGGGCCG CCCCTGGTCT TTCGATGCCG ACGGCGCATT GCTGCGGCTG
GTCACGGAAG CCAACCGGAT CAAGCTTGCA CATTATTTCG ACCCCTATCT CGCGATCCAT
ACCAGCCTAG TCGATCCGCT GCCGCATCAG ATTTCGGCCG TCTATGGCGA GATGCTGCCC
CGTCAGCCGC TGCGCTTCCT CCTCGCCGAC GATCCCGGCG CGGGCAAGAC GATCATGGCT
GGCCTTCTCA TCAAGGAACT GATCGCGCGC AGCGATCTCG AACGGTGCCT CGTCGTAGCG
CCAGGCAGCC TTGTCGAGCA GTGGCAGGAC GAGCTTGGCC AGAAGTTCAA TCTGGAATTC
GACATCCTGA CACGCGACAT GATCGAGACG TCGCGTTCCG GCAATCCGTT CTCAGACCGC
AATCGGCTGA TCGTGCGGCT CGACGTCCTG GCGCGTAATG AAGAGCTTCA GGACAAGCTC
ATGAGCGCGC AGGAATGGGA CCTGATCATC TGCGACGAAG CGCATCGCAT GTCGGCCACC
TATTTCGGCG GTGAAGTGAA ATACACCAAG CGCTACCAGA TCGGCCAGAA GCTCGGCCAG
GCCTGCCGCC ACCTGCTGCT GATGTCGGCG ACACCGCACA ACGGCAAGGA AGAAGACTTC
CAGCTCTTCA TGGCTCTGCT TGACGGTGAC CGTTTCGAGG GCCGGTTCCG CGATGGCGTC
CATTATGCCG ATACAGAAGA CATGATGCGG CGGCTGACCA AGGAGGAACT GCTTACATTC
GATGGCCGAC CGCTGTTTCC CGAGCGTCGG GCCTACACTG TCAAGTATGA GCTCTCCGAG
GGTGAGGCCG CGCTTTATAC GGCGGTGACT GAGTACGTGC GGACAGAGAT GAACCGCGTG
CAGCGTTTTG CCGAGGGCGA CGGCAAGAAG CGGAACAATG TTGGCTTCGC CTTGCAGATC
CTCCAGCGCC GCCTGGCGTC TTCGCCGGCC GCAATCTACC AGTCGCTGAA GCGCCGCCGC
GAGCGTCTGG AAAGCGAGCT CGGCGAGGCG CGCCTTGCTA CGAAGGGTCG CCGGGCAGGT
TTCGACGAGC GGGCGGTCAA TGCAGACATC CTGCGCAACA TCGAGGAATA TGGGCAAGAG
GAAATCGACG AGCTCGAGGA CCTGATCTCC ACCGGTGCGA CGACCGCCGA GACTGTGGAG
CAGCTCGTTC TTGAGGTCGA GACGCTGAAA AGCCTCGAAG CCATGGCGCT TGGCGTGCTG
CGTTCCGGCG TGGACACGAA ATGGAGCCAG CTCAACCGCA TCCTCGACGA TGATTTGATG
ATCGACTCGG CCAAGAACCG CAGAAAGCTG ATCATCTTCA CCGAACCGAA GGATACCCTG
AACTACCTGC TCGAAAAGGT GCGCGCGCGT CTTGGCAACC CCGAAGCGGT CGATGTGATC
CACGGCGGCG TATCACGCGA GGAACGCCGC AAGGTGGTCG AACGCTTCAT GCAGGACAAG
GACCTGCTCG TGCTGATCGC GAACGATGCC GCCGGCGAAG GCGTCAACCT CCAACGCGGG
CATCTGATGG TCAATTACGA CCTGCCTTGG AATCCCAACA AGATCGAACA ACGCTTCGGC
CGCATCCATC GCATCGGCCA GACGGAGGTT TGCCACCTCT GGAACCTAGT CGCGGCCGAC
ACGCGCGAGG GCGAAGTCTA TGCCCGCCTC CTCGAAAAGC TGGAGGCTGC GCGCGAGGCC
CTGGGTGGGC GCGTCTATGA CGTGCTTGGC GAATTGTTCG AGGGCACCGC ACTCAAGGAC
CTTCTGTTCC AGGCGATTCA GTATGGCGAG CAGGACGAGG TGAAGGCTCG CCTTCTGCAA
CAGGTCGATG GCGCGGTCGA CCAGACGCAC CTGCTTGAGC TGCTTCGACG CCGGGCTCTG
ACTAACGATA CCATGCCCGA AGCCAAGGTC GAGGAACTGC GGCTTGAGAT GGAACGGGCT
GAAGCACTGC GCCTTCAGCC GCATCACATC CAGAGCTTCT TCGTTGAGGC ATTCCAGCAT
CTCGGCGGTC GTCTCAAACG ACGTGAGGAA GGTCGATGGG AAGTGACTCA TGTGCCGGTG
CGCATCCGCG AACGCGATCG GCAGATCGGC ACCGGCGCGC CGATTCAAAA GCAGTATGAG
CGGATCTGCT TCGAAAAGGG CCTGATCAAC CAGCAGCCGG TAGCGGCCTT CATCTGTCCT
GGGCACCCGC TGCTAGAAGC GGTGATTAGC CTGATCCGCG AGCAGTATGA ACAGATCATG
CGGCAGGGCG CGATCCTGGT CGATGATACT GACCCGGGCG ATAGCCTCTC AGCGATCTTC
CTTCTGGAAC ACACGGTGCA GGATGGACGG ATGACGAGCG GCGGCAAACC GCATGTGATC
TCGCAACGCC TCCAGTTCAC CGCGATCGAC AAGGCGGGTG ATGCGGTCAA CGCTGGTATC
GCGCCGCATC TCAACCTTCG CCCCGCAACT ACCGAAGAGA TCGACGCCGT CGGTAACCTG
CTGGATGAGG ATTGGCTGAC GAGTGAGCTG GAGAAGACAG CCATCCGCTT CGCCACCGTG
GAGCTGGCAC AGGGGCATGT CGCGGAGATC AAGACCCGCC GCCTTCCGGA GATCGACAAG
GTCGAACAGG AGGTTCGCGC CCGGCTCAAG AAGGAAATCA ATTACTGGGA TTCCCGGGCC
TTCGAGCTGA AAGAGGAAGA GAAGGCCGGC AAGAAGGCAC GGCTGAGCTG GCAAAATGCG
CAGCGACGCG CCGAAGAACT GGCCGAGCGC CAGAAGCGCC GAATGGACCA ACTGGAGCGG
GAGCGATTCA TCACTTCGCA GCCACCCCGC GTGCGTGGCG GCATGGTCGT GATTCCGGGC
GGCCTTCTGG ATGCGCGTCA GTCTCCGGCC GTACCGAAGC ACTTCGCCGA AGATTCGGCG
GCGCGGCGCG CGATCGAACT CGCCGCGATG GAAGCGGTCA TGGCGGCGGA ACGCGCGCTG
GGAAATGTGC CCGCCGATGT GTCCGCACAG AAAATCGGTT ACGACATCGC CTCACATGAC
CCGAAGTCGG GGCACCTGCG CTTCATCGAG GTCAAGGGAC GTATCGACGG CGCTGACTCC
GTGATGGTCA CGCGGCAGGA AGTCATAACG TCGCTGCATG AGCCGGAGAA GTTCATCCTG
GCGATCGTCT CCGTCGAGGG CGGCTTCGCT CATGCCCCGC GCTATGTGCG CGGGCCGCTC
GTCGAGCGGG AGCCGTCATT CCTCGAAACG GCGATCCAGT TCGATTTGAA GCGGCTGTTG
GAGCGGGCGG AGGAGGCACA ATAA
|
|---|
| Protein sequence | MGARLEDIKN GASVRGIASA QPVQVVSVDW IGDQAISVVF RDHSGTVAES ILYRDDEHRL
EVEKTGRPWS FDADGALLRL VTEANRIKLA HYFDPYLAIH TSLVDPLPHQ ISAVYGEMLP
RQPLRFLLAD DPGAGKTIMA GLLIKELIAR SDLERCLVVA PGSLVEQWQD ELGQKFNLEF
DILTRDMIET SRSGNPFSDR NRLIVRLDVL ARNEELQDKL MSAQEWDLII CDEAHRMSAT
YFGGEVKYTK RYQIGQKLGQ ACRHLLLMSA TPHNGKEEDF QLFMALLDGD RFEGRFRDGV
HYADTEDMMR RLTKEELLTF DGRPLFPERR AYTVKYELSE GEAALYTAVT EYVRTEMNRV
QRFAEGDGKK RNNVGFALQI LQRRLASSPA AIYQSLKRRR ERLESELGEA RLATKGRRAG
FDERAVNADI LRNIEEYGQE EIDELEDLIS TGATTAETVE QLVLEVETLK SLEAMALGVL
RSGVDTKWSQ LNRILDDDLM IDSAKNRRKL IIFTEPKDTL NYLLEKVRAR LGNPEAVDVI
HGGVSREERR KVVERFMQDK DLLVLIANDA AGEGVNLQRG HLMVNYDLPW NPNKIEQRFG
RIHRIGQTEV CHLWNLVAAD TREGEVYARL LEKLEAAREA LGGRVYDVLG ELFEGTALKD
LLFQAIQYGE QDEVKARLLQ QVDGAVDQTH LLELLRRRAL TNDTMPEAKV EELRLEMERA
EALRLQPHHI QSFFVEAFQH LGGRLKRREE GRWEVTHVPV RIRERDRQIG TGAPIQKQYE
RICFEKGLIN QQPVAAFICP GHPLLEAVIS LIREQYEQIM RQGAILVDDT DPGDSLSAIF
LLEHTVQDGR MTSGGKPHVI SQRLQFTAID KAGDAVNAGI APHLNLRPAT TEEIDAVGNL
LDEDWLTSEL EKTAIRFATV ELAQGHVAEI KTRRLPEIDK VEQEVRARLK KEINYWDSRA
FELKEEEKAG KKARLSWQNA QRRAEELAER QKRRMDQLER ERFITSQPPR VRGGMVVIPG
GLLDARQSPA VPKHFAEDSA ARRAIELAAM EAVMAAERAL GNVPADVSAQ KIGYDIASHD
PKSGHLRFIE VKGRIDGADS VMVTRQEVIT SLHEPEKFIL AIVSVEGGFA HAPRYVRGPL
VEREPSFLET AIQFDLKRLL ERAEEAQ
|
|---|
| |