| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0594 |
|---|
| Symbol | |
|---|
| ID | 5424187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 667830 |
|---|
| End bp | 668810 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640879840 |
|---|
| Product | helix-turn-helix domain-containing protein |
|---|
| Protein accession | YP_001415507 |
|---|
| Protein GI | 154244549 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.64622 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACGCTTT TCCACGCATC GCAATGGTCC GTCCTTCGTC TGTCGGGCAT CGAGAATCTG
AGCGAGGCGG TGCACGGTGC CGGCCTCAAT GCCGTACAGT TGTCCGCAAC GCCGGTTACC
GCCAGCCTGG CCTTCACCGA GAGGCGCAGC ATCCGATTCA CGACTGGGAT CATCGACAAC
CAGGTGTCGC TCAGCGGACC GCTATCAGAA GATATGATTA CTTTGGGCCT CGGCATCGAC
CTGCCCCCTG GAACGCGTCA CTGGCTCAAC GATGTGACCT CCGGCAATGT TGGCGTGTTT
ATGCCGGGGG ACGAACACGA CGCTCTTTAT GCGCCGGGAT CGCTCTACGC GGTTCTTTCT
CTCAGCGGCG ACGTGCTTGA GGAGGAAGCA GCCCAACGCG AGCTTGTCCT TACGCCCAAA
GAACTGGGTG GCAGCGGCAT TCATGGCCAA CGGCTGGCGG CTTCCCAACT TGCTCTCATC
AAAAATCTGT TCCAGTCGAT CCATGCCCCG CTAGGCGACG GCGCCGTCTC CCGAATGGAT
CCGGCAGCGT ATTTCCTCAA CGCTCTCGTC GAACATGTCG GCCGCCCGCC ACGAGCATCG
ATCGGCGTTC TGGATCCTCG CGGCCATGAG CGTATCGTCA GGCGCGCGCG TGCATTCATC
CACGAGAACC TCGGATCGCC GCTGTCGGTA GAACGTATCG CGACCGCCGC CGCCACTTCG
CCGCGCACCC TGCACCGCGC GTTCCAGATG CTGCTGGACG AAACACCCTA TTCCTACGTC
CTGAAGCTCC GGCTCCATCG CATACGTTAC GACGTCATCT CAGACACCGA GCGGACAACC
ACTCTCGCTA CCATCGCAAA CCATTGGGGA ATCAGCGAAC TGGGCCGGCT GTCGGGCTGG
TATCGTGAAC TATTCGGGGA ATTGCCCTCG CAGACGCGTA GACGGCTTGC GCGGGAAGGC
GATCCCCCGA GGCTGCACTG A
|
|---|
| Protein sequence | MTLFHASQWS VLRLSGIENL SEAVHGAGLN AVQLSATPVT ASLAFTERRS IRFTTGIIDN
QVSLSGPLSE DMITLGLGID LPPGTRHWLN DVTSGNVGVF MPGDEHDALY APGSLYAVLS
LSGDVLEEEA AQRELVLTPK ELGGSGIHGQ RLAASQLALI KNLFQSIHAP LGDGAVSRMD
PAAYFLNALV EHVGRPPRAS IGVLDPRGHE RIVRRARAFI HENLGSPLSV ERIATAAATS
PRTLHRAFQM LLDETPYSYV LKLRLHRIRY DVISDTERTT TLATIANHWG ISELGRLSGW
YRELFGELPS QTRRRLAREG DPPRLH
|
|---|
| |