Gene Xaut_0431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_0431 
Symbol 
ID5420820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp469078 
End bp469827 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content71% 
IMG OID640879678 
ProductGntR family transcriptional regulator 
Protein accessionYP_001415346 
Protein GI154244388 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.21992 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACACA AGTCGGCATC TGCGGACGAG CGGGAGGACG GGGCAGCGGG AGAGGCGTCC 
GGAGGCCTCG ACGCGCGCGT CGGCCGCATC GTGCGCCAGA CGCTGGCGGA CCAGGTCTAT
GGCGACCTCA AGGAGATCCT GCTCTCCGGT CGCGCCGCCC CGGGCGAGCG CTTCACCTTG
CGCGGCCTTG CTGGCGCCAT CGGCACCAGC GCCATGCCGG TGCGCGAGGC GGTGTCGCGC
CTGGTGGCTG AGAATGCGCT GGAAGTCCTC CCCAACCGGG CGGTGCGGGT GCCGCTGATG
CCGCGCGCCC GCTTCCAGGA ACTGCGCCTC ATCCGCTGCA GCCTCGAAGG CCTCGCCACC
GAGATCGCCG TGCGCGAGGC GAGCGACGCC GAGATCGCGG AAGTGGAGCG CTTCGAGCGC
CTGTTCGCCG CCGAGCGGGA CAAGCCGCAG CCGGACGGCG CTGAAGCCAT GCGCCACAAC
AAGGACCTGC ATTTCGCGCT CTACCGCGCC GCCCATCTGC CCGCCTTGTT CCAGATGATC
GAGGGGCTGT GGCTGCAGAT CGGCCCGGTG CTGAACCTCG ATTTCCGCGC CGGTCCCGAG
CGCGTGCGCC AGGGCGAGGC GCACATCCGC CATGCAGCCA TGGTGGCCGC CCTCAAGGCC
CGTGACCCGG CGGCTGCCCG AACCGCCCTC GTCGCCGATA TCTGGAGCGC GGGGGACTTC
ATCCTGTCCC GCGATGTCCT GCCGGACTGA
 
Protein sequence
MEHKSASADE REDGAAGEAS GGLDARVGRI VRQTLADQVY GDLKEILLSG RAAPGERFTL 
RGLAGAIGTS AMPVREAVSR LVAENALEVL PNRAVRVPLM PRARFQELRL IRCSLEGLAT
EIAVREASDA EIAEVERFER LFAAERDKPQ PDGAEAMRHN KDLHFALYRA AHLPALFQMI
EGLWLQIGPV LNLDFRAGPE RVRQGEAHIR HAAMVAALKA RDPAAARTAL VADIWSAGDF
ILSRDVLPD