Gene Plav_3640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3640 
Symbol 
ID5454920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3897088 
End bp3897681 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content60% 
IMG OID640879224 
Producthypothetical protein 
Protein accessionYP_001414895 
Protein GI154254071 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.000000155227 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTGCAA TGAAAAAAGA AATCACCCCC GCCGACATTC TCCCCTACGA AACCTACGCG 
AAGGAGCGGA AAGAGCGCCG CACCGCGATC ACCGCGCTGA AGAAGAACCG CCGCGTCGAA
GTCGGGCCCC ACGCCACTTT CTATTTCGAG AATTACGACA CGATGTTCCA GCAGATCCAG
GAAATGCTGC ACATCGAAAA AGGCGGCGCA GAGCAGCTCG AGGATGAACT GCGCGCCTAC
AACCCGCTGA TCCCGCAAGG CAGCGAACTC GTCGCCACCA TCATGTTCGA GATCAATGAC
GAGGTCCGCC GCGACCGCTT CCTGCGCTCC ATCACCTGGG TCGAAAAACA TCTTTTCATC
GATGTCGGCG GCGAGAAGGT TCCGGGCGAA GCCGAAACCG ACGTCGAGCG CACGAAAGCC
GACGGCAAGA CGTCATCCGT CCACTTCGTC CATTTCCGCT TCACGCCCGG CCAGATCGCG
AAATTCCGGG ATCCCGCCAC CCAGGTCCTC GCCGTCATCG CGCATGAGAA CTACCACCAC
ATGGCCGTCC TCCCGCCCGC GGTGAAAGAG GCGCTCGCGA TGGACTTCGC CTGA
 
Protein sequence
MTAMKKEITP ADILPYETYA KERKERRTAI TALKKNRRVE VGPHATFYFE NYDTMFQQIQ 
EMLHIEKGGA EQLEDELRAY NPLIPQGSEL VATIMFEIND EVRRDRFLRS ITWVEKHLFI
DVGGEKVPGE AETDVERTKA DGKTSSVHFV HFRFTPGQIA KFRDPATQVL AVIAHENYHH
MAVLPPAVKE ALAMDFA