| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3580 |
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| Symbol | rph |
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| ID | 5456852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3827982 |
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| End bp | 3828698 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640879164 |
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| Product | ribonuclease PH |
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| Protein accession | YP_001414835 |
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| Protein GI | 154254011 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 94 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCCTT CCGGACGCCA GCCGCAGGAA ATGCGGACCG TCAGCTTCGA GCCCGGCGTT
GCCAAACATG CCGAAGGCTC CTGCCTCGTC CGCTTCGGCG ACACCCATGT GCTGTGCACC
GCCAGCCTTG AAGAGCGTGT CCCGCCCTTC CTGAAGGGCG GCGGCCAGGG CTGGGTCACG
GCGGAATACG GCATGCTGCC GCGCTCCACC CATGAGCGCA TGCGCCGCGA GGCCGCGCAA
GGCAAGCAAT CCGGCCGCAC CCAGGAAATC CAGCGTCTCG TCGGCCGCTC GCTGCGCTCG
GTGGTCGATC TGAAGGCGCT TGGCGAACGC CAGATCAGCG TCGATTGCGA CGTCCTTCAG
GCCGATGGCG GCACGCGCAC CGCCTCGATC ACCGGCGCCT GGGTCGCGCT TCATCAATGT
ATCGAATGGA TGCGCGCCCG CTCGATGATT TCGGCGCCTG TCCTGAAGGA TCATGTCGCG
GCAATTTCCT GTGGCATCTA CCAAGGCGTT CCCGTGGTCG ATCTCGACTA TGCGGAGGAT
TCGACCGCCG ACACCGACGC GAATTTCGTC ATCACCGGCA AGGGCGGCAT CTGCGAGATC
CAGGGCACGG CCGAAGGCGA ACCCTTCAGC GACGAGGAGT TCCTGTCGCT GCTGGCGCTG
GCGAAAACCT CCATCGCAGA TCTCGTGCGG CGCCAGAAGG AAGCGGTATC GGCATGA
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| Protein sequence | MRPSGRQPQE MRTVSFEPGV AKHAEGSCLV RFGDTHVLCT ASLEERVPPF LKGGGQGWVT
AEYGMLPRST HERMRREAAQ GKQSGRTQEI QRLVGRSLRS VVDLKALGER QISVDCDVLQ
ADGGTRTASI TGAWVALHQC IEWMRARSMI SAPVLKDHVA AISCGIYQGV PVVDLDYAED
STADTDANFV ITGKGGICEI QGTAEGEPFS DEEFLSLLAL AKTSIADLVR RQKEAVSA
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