| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3576 |
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| Symbol | |
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| ID | 5456276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3824567 |
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| End bp | 3825232 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640879160 |
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| Product | 2OG-Fe(II) oxygenase |
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| Protein accession | YP_001414831 |
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| Protein GI | 154254007 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3145] Alkylated DNA repair protein |
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| TIGRFAM ID | [TIGR00568] DNA alkylation damage repair protein AlkB |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.0466408 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 97 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACACACA TAATGCCAAA ACACGAGAGC CCTCTTGCCT CCAAACCGGT GGAAACGGGG
TTCGACGGCA TCGGGCTCTA TCCGGGCTTT TTCGGTGAGA CGGCTCAGAG GGCGCTTGTC
GAGAGATTGC AGGCAGGTTT CGGCGCGGCG CCGCCCTACC GTCCGCGCAT GCCGCGCACC
GGCCGCCCCT GGTCGATCCT TCAGACGAAT TTCGGCCAGC TCGGATGGGT CTCGCGCCCC
GGCGGCTATG CCTATTCGCC GGTTAATGAC GTTAGTAAAG CCCCTTGGCC GGCCATACCG
GCGGCCCTAC TCGCCCTTTG GGATGATTTG GCCGCCTATC CGGCGCCTCC GGAATGCTGC
CTGGTCAATC TCTATGACGC CCCGAAGTCG CGCATGGGCC TTCATCGGGA CGAGGACGAG
GAGGCGCTCG ATGCCCCTGT CCTGTCCCTA TCGCTCGGCG ACACCTGCAT TTTCCGGGTC
GGCGGATTCG CCCGTGGTGA TAAATCGAAA AGCTTCAGAC TCGCGAGCGG CGACGTGCTC
GTGCTCGGCG GCGCCTCCCG GCTGCGCTAT CACGGCGTGG ACCGGGTGAT TTCCGGCTCC
TCCCGCCTCA TCCCTGGCGG CGGCAGGATC AACCTGACAT TGCGCCGGGT GACCAGACCC
GCCTAG
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| Protein sequence | MTHIMPKHES PLASKPVETG FDGIGLYPGF FGETAQRALV ERLQAGFGAA PPYRPRMPRT
GRPWSILQTN FGQLGWVSRP GGYAYSPVND VSKAPWPAIP AALLALWDDL AAYPAPPECC
LVNLYDAPKS RMGLHRDEDE EALDAPVLSL SLGDTCIFRV GGFARGDKSK SFRLASGDVL
VLGGASRLRY HGVDRVISGS SRLIPGGGRI NLTLRRVTRP A
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