| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3552 |
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| Symbol | |
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| ID | 5454923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3795253 |
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| End bp | 3796146 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640879136 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001414807 |
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| Protein GI | 154253983 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.964874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTTC GACATCTGCG TTATTTCGTT GCGGCTTCCG AGCATGGGAG CTTCCGCAAG
GCGGGCGCCG CGCTGGGCGT CCAGGAGTCC ACCATCAGTC GCCGGATTCG CGACCTGGAA
GACGGGCTCG GCTCGGCACT GTTTCACCGT CACAGCGGCG GTGTATGTCT GACCGTTGCC
GGACAGCGGC TTTTGTCGAA AGCCCAAAAG GTTCTTCGAT ACATCAATGA AGGCGCGGAG
ATCGTGGACG CGGTGGGGCG CGGCACGGAA GGTCAATTGC GCGTCGGCAT CTTCTCGTCC
CTGGCATCGG GGTTCCTGCA AGATCTTCTC CGGACCTTCG CGGCAGAGCA CCCTGGCGTG
CATGTCGAGG TTGCCGATGG CAATCCCGCA GAGCATGTCG CCGCGATCCG GCAGTTCCGG
TTGGACATCG CCTTTCTGAC GGGGACGTTG GAGTGGCCCC GATGCGAGAC CACCTACCTC
TGGTCGGAAC GTGTTTTTGT GGTGCTGCCG GAAGCACACG CCCTTGCCCG CAAGGAGGAG
GTGAAGTGGC ATGATCTGGC GCACGAGACC TTCATCGTCA GCGATGTGCC GCCGGGCCAG
GAAGTCCATG ACTATCTGGT TCAGCGGGTC GCCGATCTCG GCCATCACCC GAAGATTCAG
GCGCAGTTTG TTGGGCGCGA CAATCTGTTG ACGCTCGTCG CGATCGGCAG CGGGCTAACG
GTCACGAGCG AGGCGACGAC AGCGGCCCAT GTGCCGGGCA TCTGCTATCG GCCGATCATC
GGTGAGGTCC TTCCCTTCAA CGGCGTGTGG TCGCCAAAGA ACGACAATCC GGCGCTCAGG
CGCTTTGTCA GCATGGCGAA GACGATGGCG CGTCGTCAGG GCGTGGATTT ATGA
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| Protein sequence | MNFRHLRYFV AASEHGSFRK AGAALGVQES TISRRIRDLE DGLGSALFHR HSGGVCLTVA
GQRLLSKAQK VLRYINEGAE IVDAVGRGTE GQLRVGIFSS LASGFLQDLL RTFAAEHPGV
HVEVADGNPA EHVAAIRQFR LDIAFLTGTL EWPRCETTYL WSERVFVVLP EAHALARKEE
VKWHDLAHET FIVSDVPPGQ EVHDYLVQRV ADLGHHPKIQ AQFVGRDNLL TLVAIGSGLT
VTSEATTAAH VPGICYRPII GEVLPFNGVW SPKNDNPALR RFVSMAKTMA RRQGVDL
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