| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3505 |
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| Symbol | |
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| ID | 5455041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3750431 |
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| End bp | 3751828 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640879090 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001414761 |
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| Protein GI | 154253937 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.604467 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAAC GCATCGCCAT CGTGGGTAAC GGCGTCGCCG GTCTGTCGTT GGCTTATCGC
CTTGCCAACA GCGCACCCGC ACCGAATGTA GTGATCTACG GACCGGGCGA CCTTCAAGGC
GCCTATGCAG GCAGTACCGC CGCGCCTGCA ATGGTCAATG TCCTCGGTGA GGTCACCACA
AGGGTCCGCA CCTCCTGGGC CGCGCGTCAT ATGCTGGAGA TCGGTGAGCA GGCGATGCGC
TTGTGGCCGG AATTCGTCGA GAGGCTCAAT CGCGATCTTG CGCCGCTCGG CGTCCCGCAA
GTCAATCTCT ACGGCGGAAC CTACATACTC AGCCGCCGGG ATGTTGAAGA CGAGCGGCGC
AATCTCCATG CGATATGCGA AACGCTGGCG GAGCGCGGCC ACGCTTTCGA GGAAGTAAAT
CTGAAGAAGC CTTTGCGTCA CCGCGTCGTG CGGCAGGATC GTTTCGAGCA GGGAATTTTC
GTTCCTGGTG AAATGTTTCT GAATGCCGGC AAGCTGGTGA ATGGCCTCCA TGCCGCTCTG
TCTGCACGTT CGAACGTCAC CTTCCGTCTG GTGTTTGTGG AGAAGGTCGA TGAACGGCGC
GTCGTCCGCG ACCGTGAGGG TGGTGAAGAG AGCTATGATG CCGTGGTGCT CGCCAACAGC
TTTGGCTTCA ACGATCTCAC TGAAGGTCTA GGCGTAACAG ATGTGCCGTT GATGATCCCG
GTCTACGGTA TCGGCTCCAC CATGCCAGTG ACATCCGACG AGCCGTTCAC CGTCCGCACG
CCGACCTTCG GCGCCAGCTG CGGCGACTAT GCGGTCCATT ATCCGGGACA TCTTTATGTC
GGTGCATCCG CCATCGCAAA TACGCACCGG GTCGAAGTGA CGACGCATCT GCAGCGCAGC
CTCGATTTCT ACGACCCCGA TCTGAATCTC AACGAGCTGC AACTCACGGG GGGCATCCGT
GCGATGTCGC AGGACACCTA TCCCGTCCTC GGCTCGCTTG TCCCGGGCGT CTGGGCGGCC
GCCGGTTTCT ACAAAAGCGG GATCACGCTG GCGCCCTATG TCTCCGATCT TCTGGCGCGC
GAGCTTCTCG GCGAGGAGCG CATCTACGGC AACCGCTTCC AGCCTTCCCG GCGCACCGAA
GAAGAGCCCC CGTCCCTGGA CGATCTGGTG GAAACGATCT GGGGCGAAAT CGCCGCCAGT
GGCACCAGTT CCGGCAGCCG TGCCTCCCTG AACAATTACC GCTGGCTCAT CAAGCTTCTG
GTGCGCCTCC GCACCCGCAA GGCGATCCGG TCTCTCGACG ACGACGTCTA CTACAACAGC
GACATCATCC AGGCCTGCAT CTACGACAGC TCTCTCAGCG AAAAGCTCAA CCGCCATCGT
CCGCGGCAGG CGGCTTGA
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| Protein sequence | MTQRIAIVGN GVAGLSLAYR LANSAPAPNV VIYGPGDLQG AYAGSTAAPA MVNVLGEVTT
RVRTSWAARH MLEIGEQAMR LWPEFVERLN RDLAPLGVPQ VNLYGGTYIL SRRDVEDERR
NLHAICETLA ERGHAFEEVN LKKPLRHRVV RQDRFEQGIF VPGEMFLNAG KLVNGLHAAL
SARSNVTFRL VFVEKVDERR VVRDREGGEE SYDAVVLANS FGFNDLTEGL GVTDVPLMIP
VYGIGSTMPV TSDEPFTVRT PTFGASCGDY AVHYPGHLYV GASAIANTHR VEVTTHLQRS
LDFYDPDLNL NELQLTGGIR AMSQDTYPVL GSLVPGVWAA AGFYKSGITL APYVSDLLAR
ELLGEERIYG NRFQPSRRTE EEPPSLDDLV ETIWGEIAAS GTSSGSRASL NNYRWLIKLL
VRLRTRKAIR SLDDDVYYNS DIIQACIYDS SLSEKLNRHR PRQAA
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