| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3482 |
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| Symbol | |
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| ID | 5454952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3728013 |
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| End bp | 3729239 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640879067 |
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| Product | alanine racemase |
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| Protein accession | YP_001414738 |
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| Protein GI | 154253914 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.552897 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCGC GGGCCTTTCT CCGATTCACG AAGCGAGCAC CAGTCATCGG TACCGATACA
GATCTTGCTG CCGCGGGCGG CCTTCTCACC ATCGATCTCG ATGCTGTGGC GGCGAATTAC
GACATGTTGC GGGCGGAGGC GGCCGGCGCC GAGGTTTCGG CGGTCGTGAA GGCCAATGCC
TATGGACTCG GCATGGGGCC GGTGGCCCGG CGGCTGGCGG CGGAGGGCTG CCGAAGCTTC
TTTGTGGCGG AGGCAAATGA GGGCGCGGCG CTGCGGGCGC TGCTGCCCGA CGCGGAGATT
TATGTTCTGA ACGGGCTTTT TCCGGGAACG GCGGGGTTTT ATGCCGCGCA TGGGCTCGTG
CCCTGCCTCG CCTCGATGGC GGAAGTGGCC GAATGGCGGG AGGCGGCGAA GGGCGGGAGC
CTGAAGGCGG CGCTGCATTT CGACACCGGC ATGAACCGGC TCGGCATGAG CGAGGCGGAT
GCGGCGGCGC TGGCGGCGGA GGGCGCGCTG ACGGCGGGGA TCGAGGTGCG GCTCATCATG
AGCCATCTTG CCTGTGCGGA CGATGCGGCG AGCCCGATGA ATGCAAGGCA ACTGGCGCGG
TTTCGCGGGC TGCGGACAAT ACTGGCCGGG CGCTTTGCCG GGGCGAAGGC GAGCCTGGCC
AATTCGGGCG GTATCTATCT CGGGAAAGAC TACCATTTCG ACCTGGTGAG GCCCGGCGTG
TCGCTTTACG GGGGGAGCCC CTTTACGGGG CGGGAACACC CCTTCCGCCC CGCCGTGACC
GTCGAAGCGC GGGTGCTGGC GGTGCGGGAG ATGGCGGCGG AGGAGACGGC CGGCTATGGC
GCGACCTGGA AGGCGCGCGG AACGGCCCGC ATGGCGGTGC TCGCGGCGGG ATATGCCGAT
GGCTATATGA GGGCGCTGAG CTCTCCCCGG CCAAACGGCG ATGGCGGCGA CGATTATGGC
GGACAGGTGC GGATTGCGGG TTACACTGCG CCCGTCGCGG GGCGAATCTC CATGGATATG
CTGATCGTCG ACGTGAGCGG GCTACCCGAA GGGGCGGTGA AGCGCGGCGA CATGGCGGAG
CTGATCGGCC CGCATATCAC GGTGGACGAT GTGGGCCTCA AGGCGGGAAC ACTCGGCTAT
GAAATTCTGA CGAGCCTGGG CGGCAGATAT ATGCGGATCT ATGTTTCGGG CGGCAAGGCC
ATGACTGAAG GCGGGGGACG GGTTTGA
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| Protein sequence | MIARAFLRFT KRAPVIGTDT DLAAAGGLLT IDLDAVAANY DMLRAEAAGA EVSAVVKANA
YGLGMGPVAR RLAAEGCRSF FVAEANEGAA LRALLPDAEI YVLNGLFPGT AGFYAAHGLV
PCLASMAEVA EWREAAKGGS LKAALHFDTG MNRLGMSEAD AAALAAEGAL TAGIEVRLIM
SHLACADDAA SPMNARQLAR FRGLRTILAG RFAGAKASLA NSGGIYLGKD YHFDLVRPGV
SLYGGSPFTG REHPFRPAVT VEARVLAVRE MAAEETAGYG ATWKARGTAR MAVLAAGYAD
GYMRALSSPR PNGDGGDDYG GQVRIAGYTA PVAGRISMDM LIVDVSGLPE GAVKRGDMAE
LIGPHITVDD VGLKAGTLGY EILTSLGGRY MRIYVSGGKA MTEGGGRV
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