| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3458 |
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| Symbol | |
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| ID | 5455898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3700407 |
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| End bp | 3701303 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640879044 |
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| Product | phosphoribosylpyrophosphate synthetase |
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| Protein accession | YP_001414715 |
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| Protein GI | 154253891 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
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| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.021419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGAC TCACCCTGGC CCTACCCGGC AATGAAGATC TGGCCCGCGG CATCGCGCAG
GCATGCGGCA GCGAAGCCGG CCGCATCGAA ACGCGCCGAT TCCCCGATGG CGAGAGCTAT
GTCCGGTTGC ATGGCGAACC TGCCGATCGG ATCGTGGATG TGATTTGCAC GCTGGCCCAT
CCTGATCCGC AGTTCCTGCT TCTGGCTTTT GCCGCTGACG CGGCGCGCGA ACTTGGCGCG
CAAGAGGTGA ACCTGATCGC ACCGTATCTG GCCTACATGC GCCAGGACAA GCGATTCCAT
GACGGAGAAA GCGTGACGTC GCGGTCCTTC GCACGTCTGG TCTCATCGAC CTTCGACAAG
CTGCTCACGG TGGATCCGCA TCTGCACCGC TATCCGACAC TATCAGCGGT CTACACGATC
CCCACCATCA CCTTGCATGC CGCACCACTG CTGGCCGACT GGATCGCGAA TCATGTCGAA
GAACCTTTGA TCGTGGGCCC CGACGAGGAA AGCGAGCAGT GGGCCGGCGC CATCGCGTCC
CGCATCGGCG TACCGCACGC TGTGCTTCGC AAGACACGCC ATGGCGATCG CAGCGTGGAC
ATCGATGTTC CCGACCTGTC GATCTGGCGC GGCAGAACGC CGGTGCTTGT GGACGACATC
GCATCATCAG GCCGCACGCT CGCCGTCGCG GCGCGCAAGC TCGCCGAGCA AGGAATGCGC
AAGCCGGAGT GCGTAGTGGT GCATGCCCTG TTCGCCGAGG ATGCCTGGGC CCAATTGACA
CCGTTGTTTG CCCGAATTAC GTCCACCGAC GCAGTACCGC ATCCGAGCAA CCGGATTGGT
CTCGCTTCGC TGATTGCCGA CGCTCTCTCT AGCGGGAAAA CCGATCCGCG AGGCTGA
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| Protein sequence | MQRLTLALPG NEDLARGIAQ ACGSEAGRIE TRRFPDGESY VRLHGEPADR IVDVICTLAH
PDPQFLLLAF AADAARELGA QEVNLIAPYL AYMRQDKRFH DGESVTSRSF ARLVSSTFDK
LLTVDPHLHR YPTLSAVYTI PTITLHAAPL LADWIANHVE EPLIVGPDEE SEQWAGAIAS
RIGVPHAVLR KTRHGDRSVD IDVPDLSIWR GRTPVLVDDI ASSGRTLAVA ARKLAEQGMR
KPECVVVHAL FAEDAWAQLT PLFARITSTD AVPHPSNRIG LASLIADALS SGKTDPRG
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