Gene Plav_3423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3423 
Symbol 
ID5455788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3659463 
End bp3659912 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content64% 
IMG OID640879012 
Productputative signal peptide 
Protein accessionYP_001414683 
Protein GI154253859 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.410037 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTCGA ACTTGACTGA CTTGACCCGT GGCCTTGCGC TGGCCGTTGC CGTTGCGGTG 
CTCGGCGGCT GCGCCACCAG CAAGGAAAAG CTGCTGCCCC ACGGTAGCAG CACGATGATG
GACATTTGGC AGCAGGAAGC CGGCGACGGT GGCGGCGGTG CTGGCCAGGT AGCGCGCAGG
CAATTGCTCG ATGCGCGTCA AAGCCTGCGT CGGCCGCTGA CCGAAGCGGA CGTGCAGGCC
GCACCTTCTG AGCAGATGCG CTACACGCGC ACGGCGCGCA ACGAAGTCTA TCGCCAATTT
CAGCGCCTGC CGAATCCCGA CCTTGTGATG TATGTGTTCC CCCACCTGGC GGGCACCGAC
CCCATACCTG TGCCGGGCTA CACGACCGTT TTCCCCCTGT ACCAGCGTAC CCAGTACGCC
ATGCCGGGCG AGCGCGTGGA GGATTATTGA
 
Protein sequence
MLSNLTDLTR GLALAVAVAV LGGCATSKEK LLPHGSSTMM DIWQQEAGDG GGGAGQVARR 
QLLDARQSLR RPLTEADVQA APSEQMRYTR TARNEVYRQF QRLPNPDLVM YVFPHLAGTD
PIPVPGYTTV FPLYQRTQYA MPGERVEDY