Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3423 |
Symbol | |
ID | 5455788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 3659463 |
End bp | 3659912 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640879012 |
Product | putative signal peptide |
Protein accession | YP_001414683 |
Protein GI | 154253859 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.410037 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCTCGA ACTTGACTGA CTTGACCCGT GGCCTTGCGC TGGCCGTTGC CGTTGCGGTG CTCGGCGGCT GCGCCACCAG CAAGGAAAAG CTGCTGCCCC ACGGTAGCAG CACGATGATG GACATTTGGC AGCAGGAAGC CGGCGACGGT GGCGGCGGTG CTGGCCAGGT AGCGCGCAGG CAATTGCTCG ATGCGCGTCA AAGCCTGCGT CGGCCGCTGA CCGAAGCGGA CGTGCAGGCC GCACCTTCTG AGCAGATGCG CTACACGCGC ACGGCGCGCA ACGAAGTCTA TCGCCAATTT CAGCGCCTGC CGAATCCCGA CCTTGTGATG TATGTGTTCC CCCACCTGGC GGGCACCGAC CCCATACCTG TGCCGGGCTA CACGACCGTT TTCCCCCTGT ACCAGCGTAC CCAGTACGCC ATGCCGGGCG AGCGCGTGGA GGATTATTGA
|
Protein sequence | MLSNLTDLTR GLALAVAVAV LGGCATSKEK LLPHGSSTMM DIWQQEAGDG GGGAGQVARR QLLDARQSLR RPLTEADVQA APSEQMRYTR TARNEVYRQF QRLPNPDLVM YVFPHLAGTD PIPVPGYTTV FPLYQRTQYA MPGERVEDY
|
| |