| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3407 |
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| Symbol | |
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| ID | 5453901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3645099 |
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| End bp | 3646913 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640878996 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001414667 |
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| Protein GI | 154253843 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0218597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.428032 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTCGC GTAACGTCGG TACAGCCTAC CTGGCTCAGG CTGCCGAGTT GGCTGGAAAT
CCAGGGCAGT TGGCAGCTTA CAACTCTCAA GGACATTGTG TGGTACTCGC CGGTCCCGGG
AGCGGTAAGA CCAAGACGCT CGTCCTAAAG CTCGCCCGAA TCCTGGCCGA AGACGTCGAG
TCCCCTCGTG GCGTTGCGTG CATCACGTAC AGTCAGGAGT GCGCTCGCGA ACTCGTTCGC
CGAATTGAAA GCTTGGGACT TCAGCAGGCA CCTAATCTTT TCATTGGTAC AGTCCATGGG
TTCTGTCTGC GTCATCTCTT GATGCCGTAT GGACGCTTGG CCGGCCTGCC CATATCCTTC
CCGCTTTCGG TGGCCACTCA ACGAGTCAGT GATCGGTTGT TGAAGCAAAC TGGAGACGCA
ATTTTCGGGC AGAACCATCC GTACAAGGTC ATTGACCTCG GGCGGCATCG CCGTTCCGTG
CTCAATCGAA ATAGCGTCGC TTGGCGTAGC GAGGAGGAGC TCGCTGCGTG GGCCGAGGCC
TACGAGGCCG CTCTGCGCGA CGAGGGGCTG ATTGACTACG ATGACATGGT CGTCTTCGGC
CAGCGTTTGA TCGCCGAGCA CGACTGGGTA CTACCTCTGG TTCAGGCAAA ATTCCCCGTG
CTCGCGGTGG ATGAGTACCA GGATTTAGGC GTGGCACTGC ATCGCATCGT CAAACGCCTT
GCCTTCGACG GGGGTGTCCG ACTTTTCGCG GTCGGTGATG CGGATCAGTC GATCTATGGA
TTCACGGGCG CTGACGGCGC GTTGCTCATG GAGCTGGCCG CACGCGGAGA CATCGAGCCT
GTTAGGCTCC AACTGAATTA TCGCTCTGGC ACAGGGATCG TGACGGCGTC GGAGATGGCG
CTCGGAGAAG TCCGGGGCTA TCAAGCGAGC GATCCAGCTC GACAAGCGAC CATTGAATTC
GTCCTGCGGC CAGGTGGTAT GGCCGATCAA GCCGCGCACG TTGTCGCGCA AATTATTCCG
GCAGCATTGG CTTCTAAGCC GGGACGAACA CTGGGTGATA TCGCAATCTT GTACAAAGAC
TACCGCGCAG GCGATATCGT CTCCGAAGCT GTGACCGCCG GCGGTTTAGA TTACATCCGC
GTGGACACTG CGGCGCCTTA CCGCAAGGTT TCCCTGACGA GCTGGGTGGA AGATTGTGCG
GCGTGGTGCG CGGGCGGCTG GCGTGTCGGA CGCCCACAAT TGCGCGGACT GATCGACCGC
TATCTCGCAT TTCATCGAGC GAGCTTGGAC GATGCACAAG CTAGGCGCGA GGGACAAGAG
CTAACCGCTT TGCTATGGGC GTTACGCTCC GACCAGCAAC CTGCGCGTGA TTTTGTCGCT
TCGCTGCGTA GCGGCATCGT TGACCGTCTG TTGGCTGCTG AATTGGCGCT TGCCGATCAG
AAGGAACAAC TCGATCGCAT GACGGCAGCG CTCGCCGAAG GCGGCGCACT GGCTACGCTG
GACATGACGA GTTTGGGCGG TAGGGACGGT TCGCCTGATC ATCTAAATCT GCTGACACTC
CACTCCGCAA AAGGGTGCGA GTACGATGTG GTCATCATGG TCGGTCTCGA CCTCGGAAAT
CTACCGTGGC GCAACGAGAG TCCAGAGAAG TTGCGAGAAA GCCGCCGGCT GTTCTACGTG
GGTCTCACAC GTGCGCGTGA CGAGGTCCAC ATGTTGTATT CGGGGTTCGT TGAGGGGCGC
TATGGCCCGA TGCGCCTTGG GCGCTCGCCA TTCTTAGATG AGCTAGAGGC TCGAATGCGT
GCCACCGGCA TTTGA
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| Protein sequence | MPSRNVGTAY LAQAAELAGN PGQLAAYNSQ GHCVVLAGPG SGKTKTLVLK LARILAEDVE
SPRGVACITY SQECARELVR RIESLGLQQA PNLFIGTVHG FCLRHLLMPY GRLAGLPISF
PLSVATQRVS DRLLKQTGDA IFGQNHPYKV IDLGRHRRSV LNRNSVAWRS EEELAAWAEA
YEAALRDEGL IDYDDMVVFG QRLIAEHDWV LPLVQAKFPV LAVDEYQDLG VALHRIVKRL
AFDGGVRLFA VGDADQSIYG FTGADGALLM ELAARGDIEP VRLQLNYRSG TGIVTASEMA
LGEVRGYQAS DPARQATIEF VLRPGGMADQ AAHVVAQIIP AALASKPGRT LGDIAILYKD
YRAGDIVSEA VTAGGLDYIR VDTAAPYRKV SLTSWVEDCA AWCAGGWRVG RPQLRGLIDR
YLAFHRASLD DAQARREGQE LTALLWALRS DQQPARDFVA SLRSGIVDRL LAAELALADQ
KEQLDRMTAA LAEGGALATL DMTSLGGRDG SPDHLNLLTL HSAKGCEYDV VIMVGLDLGN
LPWRNESPEK LRESRRLFYV GLTRARDEVH MLYSGFVEGR YGPMRLGRSP FLDELEARMR
ATGI
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