Gene Plav_3399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3399 
Symbol 
ID5456765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3637256 
End bp3638185 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content65% 
IMG OID640878988 
Producthypothetical protein 
Protein accessionYP_001414659 
Protein GI154253835 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.806094 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.208822 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCA CTTCCAACGA GAAATCGTAT TTCGACCTCC ACACCTCGGG CATCGGCTAC 
CTCCAGCGTG TCCGTGAGGT GCCCGTCAGG GGCGGCCGCC GTGCGCAGCC CTTCCTGGCC
TGCACCATCG CCGCGCTGGT CGGCCCCGCC AGGGACCCGA GCTACCGCTA CTTCGACGTC
AAGGTCTCGG GTGCCGAGGC CAAGAAGCTC GTTCAGCGCT ACATCGGCGT TGACGATTCC
AAGCAGCGAC CGCTGGTGCG CTTTCGCCTC GGCGACCTCT GGGGCGATGC CTACATCCGC
GACAAGGGCG AACAGAAAGG CCAGGCCGCC GCATCCCTCA AGGCGCGACT GCTCAAGGCC
GAGCTGATCG AGCGGGCCGA ACTGGCTTCG ATCGAGCAGC ACGAGTTGAT CACCCGTGGC
ATCGGCTACC TCAACCGTCC GAAGGACGTC ACCCCCAAGG ATGGTGACCC GTTCCTGTCG
TGCTCCATCG CCGCGCTGGC CGGACCTGTC GATGAACCGG AATATCGGTA CTTCGACACG
ATCGTCGCCA CCCCTGAAGC CGAGCATCTG GTTCGCCGAT GCGTGCAGGC CATCGAAGGG
GATCGCAAGG TGCTGATCGC CTTTCGTCTG AACGACATGA AGATCGATCC GTACATCCGC
ACCAAGGGCG AGCACGCTGG GGAACCGGCC GCAAGCCTGG AATCGACGCT GGTCCACATC
GGTCTGATCA AGATCGACGG CACCCAGGTC TATCCGACGA GCCAGGCGCA TGCCGAGGCA
GCGCCAGCGG AGGACGCACC CGCGTCCGAA GCCGCCAACG CCATCGACAC TGCCGCCGAC
GCCGTTTCCT ACCAATCTGC CGAGCCCGCC GAGCGCGAGC CCGAATGTGC AGTCGAGGAG
CAGGAGCCGG CATTGGCTGC TTCGTTCTGA
 
Protein sequence
MNTTSNEKSY FDLHTSGIGY LQRVREVPVR GGRRAQPFLA CTIAALVGPA RDPSYRYFDV 
KVSGAEAKKL VQRYIGVDDS KQRPLVRFRL GDLWGDAYIR DKGEQKGQAA ASLKARLLKA
ELIERAELAS IEQHELITRG IGYLNRPKDV TPKDGDPFLS CSIAALAGPV DEPEYRYFDT
IVATPEAEHL VRRCVQAIEG DRKVLIAFRL NDMKIDPYIR TKGEHAGEPA ASLESTLVHI
GLIKIDGTQV YPTSQAHAEA APAEDAPASE AANAIDTAAD AVSYQSAEPA EREPECAVEE
QEPALAASF