| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3293 |
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| Symbol | |
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| ID | 5456625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3523350 |
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| End bp | 3525320 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640878884 |
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| Product | AsmA family protein |
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| Protein accession | YP_001414555 |
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| Protein GI | 154253731 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.187573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.760873 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTGGC GTGCACATCC TCGGCTCGCG GTCTTCGCCG TTCTGGCGGT GATCGCGGTT
GTCCTCTTTA TCTTCTGGGA CTGGAACTGG TTCCGCCCGA TGGTGGAGGC GCGGGTATCC
GCCGCGGCAG GACGCGAGGT TCGCATCGGC CATTTCGATG TCGATCTTTC ATTCACACCC
CGTGCCGTTC TCGACGATGT GACCATCGAG AACCCGTCCG GTTTCGGCGA GGAAGAGCCG
CTTGGCAGCA TCGAGCGGCT GAGCGTAAGC CTGCGGGCCG GGCCGGCCCT GCGCGGCCGC
ATCGTCATTC CGGAAATCCG CCTCGTGAAG CCGGTGGGCA ATCTTCGCAG CAACAGCGAG
GGCGTGCGCA ACTGGGATTT CGGGACGTCC AGCTCCGGCG AAGGCGGCGC GATGCCGGAG
ATCGGCGAAC TCATCATCGA GGAGGGATCG GTCCGCTTTG CCGATCCTGA ATTGCAGGCG
GACTTCACGA CCCTCATTCA CACCGAAGAA GCCGACGGCG AAGCGATGCT AGTGGCGACG
ACCGAGGGCA CCTACAACGG TGCGCCTGTC GAGGCCCGCT TCCGCGGCGG CGCGCTTCTG
ACGCTGCGCG AGACGGAGCG TCCCTATCCG GTGCACCTTC AGGCGAAAAA CGGCGATACG
CATATTTCGC TGGAGGGCAC GCTCGTCAAT CCGCTCGAAT TTGCGGGTGC GCAACTTGCG
CTCGAACTGG AGGGCAAGTC GCTCGACCAT CTCGAACCGA TCATCCTTAT CCCGCTCGTC
TCGACGCCGC CCTACCGGCT GGAAGGCCGC CTCGACTACG CGGAAGGGCG TATCCGTTTC
AACGACTTCT CCGGCCGCGT CGGACAGAGC GACCTCTCCG GCGACTTCGC CGTCGATCCG
GGCGAGGAGC GTCCGCAAAT CACCGCCGAC CTCCGCTCGA AGCGCGTGCT GCTCGCCGAT
CTCGGCGGCT TTATCGGTGC CGCGCCCGGC GAGGTGAGCC AGCAGCCGGA TATGTCGGAA
GAACAGCAGG CCGAGCATGC GAGGTCCGAG GCAAGCCCGC GGCTCCTCCC CGATGAGCCT
TTTGAAATAC CCGACATTCG CGCAGCCGAT TTCGACGTGC GCTATGAGGC GACGCGGATC
GAAGGCGACA ACATGCCCCT CGATAATCTT GTGACGGTGC TGAAGATCGA GAATGGCAAG
GTGACGCTGG AGCCGCTCAA TTTCGGCGTC GGCCAGGGCG AGATTTCCAG CAACATCATG
CTGGATGCGC GCGAGGACCC CATGCATGTC ACCGCCGACA TTGATTTCCG CCGGGTCGAT
CTCAGCCGCG TGATGGACGC GACAGGCGTG TTCGAGGGAA CCGGCACCAT TGGCGGACGT
GCCGTTCTCG AAACGAGAGG CAATTCGATT GCTTCCATGC TTGGAAGCGG CGATGGCGAG
CTCCGGCTTT TCATGGCGGG CGGCGACATG AGTGCGCTGC TCGTCGATCT GGCGGGCCTC
GACATCGGCA ATTCGATCCT GTCTCTGCTC GGCCTGCCGG ACCGGACGGC CATCCGTTGC
ATGGTGAGCG ACTTCAAGCT GGAGGACGGT CAACTGCTGA CACGCGCCCT TTATGTCGAT
ACGGAAAAGG CGAACATTGT CGGCGAAGGC GCCATCGATC TTGGCGAGGA AACGATCGAC
TACCAGATCA CCACCGAGCC AAAGCAGCCG AGCATCGGCG CGGTGGCCGC ACCCATCAAT
ATCGAGGGGA GGCTCAAGGA CCCCGCGATC GGGCCGGACG CCGAGGCACT GGCGGCGCGC
GCCGGCACGG CCACCATTCT CGGGGTGCTG CTGACGCCCC TGGCCGCCCT TCTGCCCACC
ATCCAGCTCG GCCTCGGCGA GGACAATGAG TGCGTGGAGA GCGTCAACCG GATGGAACGC
GAGAGCGAGG CCCTGCCGCG GAACGGAACG GACGAACCGG CTGAAAATTG A
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| Protein sequence | MDWRAHPRLA VFAVLAVIAV VLFIFWDWNW FRPMVEARVS AAAGREVRIG HFDVDLSFTP
RAVLDDVTIE NPSGFGEEEP LGSIERLSVS LRAGPALRGR IVIPEIRLVK PVGNLRSNSE
GVRNWDFGTS SSGEGGAMPE IGELIIEEGS VRFADPELQA DFTTLIHTEE ADGEAMLVAT
TEGTYNGAPV EARFRGGALL TLRETERPYP VHLQAKNGDT HISLEGTLVN PLEFAGAQLA
LELEGKSLDH LEPIILIPLV STPPYRLEGR LDYAEGRIRF NDFSGRVGQS DLSGDFAVDP
GEERPQITAD LRSKRVLLAD LGGFIGAAPG EVSQQPDMSE EQQAEHARSE ASPRLLPDEP
FEIPDIRAAD FDVRYEATRI EGDNMPLDNL VTVLKIENGK VTLEPLNFGV GQGEISSNIM
LDAREDPMHV TADIDFRRVD LSRVMDATGV FEGTGTIGGR AVLETRGNSI ASMLGSGDGE
LRLFMAGGDM SALLVDLAGL DIGNSILSLL GLPDRTAIRC MVSDFKLEDG QLLTRALYVD
TEKANIVGEG AIDLGEETID YQITTEPKQP SIGAVAAPIN IEGRLKDPAI GPDAEALAAR
AGTATILGVL LTPLAALLPT IQLGLGEDNE CVESVNRMER ESEALPRNGT DEPAEN
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