Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3285 |
Symbol | |
ID | 5455435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 3517983 |
End bp | 3518465 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640878876 |
Product | membrane protein-like protein |
Protein accession | YP_001414547 |
Protein GI | 154253723 |
COG category | [S] Function unknown |
COG ID | [COG2323] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.22155 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 0.983 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACGAAC CGATGCTGTT CGATTCATGG ACCGGCCTTT GGCGTGTGCT CTTTGTCGGT ACGGCGGCCT ATGCGAGCCT TGTCCTCGTC CTGCGCGCCT CGGGCAAGCG CACGCTCAGC AAGATGAATG CATTCGATCT GGTGGTGACG GTGGCGCTCG GCTCGACCTT GGCGACAGTC CTGCTCAACC GGTCGGTGCC GCTCGCGGAA GGGGTTCTCG CCCTCGCGCT TCTCGTCTTC CTGCAATATG CGCTGACATG GCTGGCGGTC CGCTCACCCG CCGTCGAGAA CATCGTCAAA AGCGAACCGA CGCTTCTCGT CCGCAATGGC GCCTGGCTCG ATGGCGCCTT GCGCCGGCAG CGAGTCACGC GCGAGGAAGT GGAAGCGGCG CTGCGCGAGC ATGGTCTCGC CGATATTTCC GGTGCCGCCG CCGTGGTTCT CGAAACGGAT GGCTCCCTCA GCGTGATAGG CAAGGCGGCA TGA
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Protein sequence | MNEPMLFDSW TGLWRVLFVG TAAYASLVLV LRASGKRTLS KMNAFDLVVT VALGSTLATV LLNRSVPLAE GVLALALLVF LQYALTWLAV RSPAVENIVK SEPTLLVRNG AWLDGALRRQ RVTREEVEAA LREHGLADIS GAAAVVLETD GSLSVIGKAA
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