Gene Plav_3285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3285 
Symbol 
ID5455435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3517983 
End bp3518465 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content64% 
IMG OID640878876 
Productmembrane protein-like protein 
Protein accessionYP_001414547 
Protein GI154253723 
COG category[S] Function unknown 
COG ID[COG2323] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.22155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.983 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACGAAC CGATGCTGTT CGATTCATGG ACCGGCCTTT GGCGTGTGCT CTTTGTCGGT 
ACGGCGGCCT ATGCGAGCCT TGTCCTCGTC CTGCGCGCCT CGGGCAAGCG CACGCTCAGC
AAGATGAATG CATTCGATCT GGTGGTGACG GTGGCGCTCG GCTCGACCTT GGCGACAGTC
CTGCTCAACC GGTCGGTGCC GCTCGCGGAA GGGGTTCTCG CCCTCGCGCT TCTCGTCTTC
CTGCAATATG CGCTGACATG GCTGGCGGTC CGCTCACCCG CCGTCGAGAA CATCGTCAAA
AGCGAACCGA CGCTTCTCGT CCGCAATGGC GCCTGGCTCG ATGGCGCCTT GCGCCGGCAG
CGAGTCACGC GCGAGGAAGT GGAAGCGGCG CTGCGCGAGC ATGGTCTCGC CGATATTTCC
GGTGCCGCCG CCGTGGTTCT CGAAACGGAT GGCTCCCTCA GCGTGATAGG CAAGGCGGCA
TGA
 
Protein sequence
MNEPMLFDSW TGLWRVLFVG TAAYASLVLV LRASGKRTLS KMNAFDLVVT VALGSTLATV 
LLNRSVPLAE GVLALALLVF LQYALTWLAV RSPAVENIVK SEPTLLVRNG AWLDGALRRQ
RVTREEVEAA LREHGLADIS GAAAVVLETD GSLSVIGKAA