| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3280 |
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| Symbol | |
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| ID | 5455217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3512324 |
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| End bp | 3513682 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640878871 |
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| Product | peptidase M48 Ste24p |
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| Protein accession | YP_001414542 |
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| Protein GI | 154253718 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.227869 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.68858 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCTGA AAGCCGTGCA GCGGAAAGTC GGCGCGACGA TGACAAGTCT CATTGTCGGC
GCGAGCCTTG CCTTTACCGG CGCGGCCCCT GCTTCCGCGC AGCGCATCGC GCTCATCAGC
GATGCCGAAA CCGAAAACAT GCTGCGGGAA TATACCGATC CGATCCTGCG GGCGGCGGGC
CTCGAATCGA GCGCGGTGAA GCTTCACCTC GTGAACGACC AGTCGCTCAA CGCCTTCGTG
GCTGCCGGGC AGCAGATGTT CTTCAATACC GGCCTCATCA CCACGGTCGA CACGCCTTCC
GAACTCATCG GCGTCATCGC GCATGAAACC GGCCATATGG CGGGCGGCCA TCTCGTGAAG
CGGCGCGAGG AAATGGAAGG CTTGAGCGTT CCGATGCTCG CTTCCATGAT CCTCGGCGTG
GGCGCGATCG CGGCCGGCGC GGGCGATGCG GGCATGGCGG TCATCATGGG CAGCCAGCAT
CTGGCGACGC GGAGCCTGCT CGCCTTCACG CGCGAACAGG AAGCCAGCGC CGACCAGGCG
GGCGCGACCT ATCTGCAGCG GTCCGGCATG TCCGGCCGCG GCATGCTCGA CCTCTTTGCC
ACCATGCGCG ACCAAGAGCT GCTGACGGAA AACCGGCAGG ACCCTTATGC GCGTTCTCAC
CCGATGTCCG GCGCGCGGCT TTCGGCGCTT GAAGCGCGGG TGAAGGAATC ACCCTATTAC
GACCGCCGCG ACTCGCCCGA GCGTCTCCAC CAGTTCAAGA TGGTGCAGGC GAAGCTGCAT
GGCTTTCTCG ACGACCCGAA CGCGACCTTC AACCGCTATC CCGAGTCCGA CAACAGCACC
TATGCGCGAT ATGCGCGCGG CGTCGCCTAT CATCGCACAG GCAGGCTGGA CAAGGCGATG
AGCGAAATCG AGCCGCTGCT GGAGATGGAG CCGTCGAACC CCTATATCCG CGAGGTTCAA
GGGCAGATCT ATTTCGAGAG CGGCAAGGTC GAGGAAGCGA TTTCTTCCTA CCGGCAGGCG
CTGGCGCTGC TGCCGGACGA ACAGTTTCAT CTCGGCCTCG GACGGGCGCT GCTGGCGCGC
GGCGACAAGG CCTCCTCGGA GGAAGCGGTC AAGCACCTGC AGGCGGCGAG CAGCAGCGGC
AACCAGCCCT ACGCCTTCTA CCAGCTCTCC ATCGCTTATG GGCAGCTCGA CAATATCGGG
ATGGCGCAAT TGGCGACGGC GCAGTATTAC GATGCGCTGG GTGCGGTGAA GGAAGCGAAG
ATGCATGCGA CCCGGGCCCA GAAGCTCCTG ACCAACGGGA GCCCCGAATG GCTTCGCGCG
CAGGACATTC TCGTGCAGCC CAATCCTCAA CGCGGTTGA
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| Protein sequence | MLLKAVQRKV GATMTSLIVG ASLAFTGAAP ASAQRIALIS DAETENMLRE YTDPILRAAG
LESSAVKLHL VNDQSLNAFV AAGQQMFFNT GLITTVDTPS ELIGVIAHET GHMAGGHLVK
RREEMEGLSV PMLASMILGV GAIAAGAGDA GMAVIMGSQH LATRSLLAFT REQEASADQA
GATYLQRSGM SGRGMLDLFA TMRDQELLTE NRQDPYARSH PMSGARLSAL EARVKESPYY
DRRDSPERLH QFKMVQAKLH GFLDDPNATF NRYPESDNST YARYARGVAY HRTGRLDKAM
SEIEPLLEME PSNPYIREVQ GQIYFESGKV EEAISSYRQA LALLPDEQFH LGLGRALLAR
GDKASSEEAV KHLQAASSSG NQPYAFYQLS IAYGQLDNIG MAQLATAQYY DALGAVKEAK
MHATRAQKLL TNGSPEWLRA QDILVQPNPQ RG
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