Gene Plav_3257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3257 
Symbol 
ID5454639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3480074 
End bp3480433 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content56% 
IMG OID640878848 
Productiron-sulfur cluster assembly accessory protein 
Protein accessionYP_001414519 
Protein GI154253695 
COG category[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00049] Iron-sulfur cluster assembly accessory protein 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.319112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGAC CCACACCAAA GGCGATAACG CTTACAGAAA TCGCGGCGGC GCGCATGAAG 
GAGATCATGG CCGCTTCCTC CGGAAAATAT ATCGGCGTGA GGATCGGCGT AAAGAACGGG
GGCTGCGCCG GCATGGAATA CACGATGGAA TATGCCGAAG ACGTGAAGCC GCTCGACGAG
GTGGTGGAAG ACCGGGACGT GAAAATTCTG ATCGACCCGA AAGCTATTCT GTTCCTGCTT
GGTACCGAGA TGGACTATAG CGAAGAGAAG TTTTCGGCGG GCTTTCGTTT CAACAACCCT
AACCAGACAG ATGCCTGCGG CTGCGGCGAG AGCGTTTCCA TCACTCCCGC CACCCTCTAA
 
Protein sequence
MARPTPKAIT LTEIAAARMK EIMAASSGKY IGVRIGVKNG GCAGMEYTME YAEDVKPLDE 
VVEDRDVKIL IDPKAILFLL GTEMDYSEEK FSAGFRFNNP NQTDACGCGE SVSITPATL