| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3252 |
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| Symbol | |
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| ID | 5454362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3473701 |
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| End bp | 3475215 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640878843 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001414514 |
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| Protein GI | 154253690 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0717985 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.458029 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTTG ACGAACTCGG CCTCGCGCCA GAGGTATTGA AAGCTGTATC CGAAACCGGA
TACACGGAAC CGACGCCTAT CCAGGCGCAG GCAATTCCAC ATGTTCTGGC GGGGCGCGAC
GTGCTGGGCA TCGCCCAGAC CGGTACGGGC AAAACGGCTT CCTTCACGCT TCCGATGATC
GACAAGCTGT CGCGCGGACG TGCGAGGGCA CGGATGCCCC GGTCACTGAT CCTCGAGCCG
ACGCGCGAAC TAGCCGCGCA GGTCGCCGAA AATTTCGAAA CCTACGGCAA GTATAACAAG
CTCTCGATGG CCCTTCTTAT TGGTGGGGTC TCCTTCGGTG ACCAGGAAAA GAAGCTGGAT
CGCGGGGTAG ACGTCCTCAT CGCAACACCA GGCCGCCTCC TCGACCATTG CAATCGTGGC
AAGGTACTGC TGACGGGGGT GCAAATTCTC GTGATTGATG AAGCTGACCG CATGCTGGAT
ATGGGGTTCA TTCCCGATAT TGAGGAAATC TGCAAAAAGC TTCCCTTCAC GCGCCAGACA
CTCTTCTTTT CTGCAACGAT GCCGCCTGAA ATCCAGCGGC TGACCGACAC GTTCCTGCAC
AATCCCGAAC GGATCGAAGT GGCGAGAGCG TCCTCCACCA GCGCAAACAT CAAGCAAGTG
CTGCTGAAGA CGACGCGGGA TGGAAAACGC GACGTGCTTC AACGGATGAT CGAGGAAGAC
AACGTCAAGA ACGCAATCAT TTTCTGCAAT CGCAAGCGCG ACGTTTCGGT GCTGGAACGG
GCGCTCTCGA AAAGCGGGCT TTCAGCTGGC GCAATCCATG GCGATCTCGA TCAGTCGACG
CGAACCCGGA CGCTGGACGG CTTCCGCAAC GGCACAATTC GCCTTCTGGT CGCAAGCGAT
GTAGCCGCAC GCGGCCTGGA CATTCCCGAT GTCAGCCATG TGTTCAACTA CGACGTACCA
AGCCATGCGG AGGATTATGT ACACCGCATA GGGCGGACTG GACGCGCCGG CAAGAGCGGC
ACTGCCGTGA CACTTTCGAC GCGTGAAGAC GGCAAGTATC TTGCTGCGAT CGAAAAGCTG
ATCGGCAACC CAATCCCTTC AGGCGACGTG GACGTTCCTG CGGCACCGGC AGAAGCCGAC
GCTTCGCCAG CAGTGGCGGC GGAAGCAAGC ACCGAGATGT CCGTCGACGA GCCCAAGGAA
GAGAAGAGAA GCCGGGGGCG CCGCGGTGGG CGCGGACGCA AGGACAAGGC GGACTCTGTC
GAGACGGTAA ACGCCGCCGC CCCAGCCGAA CCCGCTGTCG TGCAAAGCGC TGAGCGGGCA
CGCCCGGAGC CGGCCAAGGC CGAGGAAAGG CCGGCGCGGC GCGAACGCGG CGGACGAGAT
CGCGACCGCG ACGACGATCG CCCGGTTGTC GGACTTGGCG ACCATGTACC GGCCTTCATA
TTGCGGGCGG TAAAGCTGCC CAAGAAGAGC AAGGATACGG AAGAAGAAAT GGAAACCGAG
GCGGAAGACG CCTGA
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| Protein sequence | MTFDELGLAP EVLKAVSETG YTEPTPIQAQ AIPHVLAGRD VLGIAQTGTG KTASFTLPMI
DKLSRGRARA RMPRSLILEP TRELAAQVAE NFETYGKYNK LSMALLIGGV SFGDQEKKLD
RGVDVLIATP GRLLDHCNRG KVLLTGVQIL VIDEADRMLD MGFIPDIEEI CKKLPFTRQT
LFFSATMPPE IQRLTDTFLH NPERIEVARA SSTSANIKQV LLKTTRDGKR DVLQRMIEED
NVKNAIIFCN RKRDVSVLER ALSKSGLSAG AIHGDLDQST RTRTLDGFRN GTIRLLVASD
VAARGLDIPD VSHVFNYDVP SHAEDYVHRI GRTGRAGKSG TAVTLSTRED GKYLAAIEKL
IGNPIPSGDV DVPAAPAEAD ASPAVAAEAS TEMSVDEPKE EKRSRGRRGG RGRKDKADSV
ETVNAAAPAE PAVVQSAERA RPEPAKAEER PARRERGGRD RDRDDDRPVV GLGDHVPAFI
LRAVKLPKKS KDTEEEMETE AEDA
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