| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3238 |
|---|
| Symbol | |
|---|
| ID | 5455723 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 3457809 |
|---|
| End bp | 3458171 |
|---|
| Gene Length | 363 bp |
|---|
| Protein Length | 120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640878829 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001414500 |
|---|
| Protein GI | 154253676 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3671] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.616877 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 0.598672 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATA CCCAGCCACC GGTGGCGCAA CCAGCGCCCG GTGACCTCGA TGCGGCCAAG
CTTGTTTACA TTCTGTACTT CATAAGCGTC GTGGTGGGGA TTACGGCGCT GGCCGGCGTC
ATATTCGCCT ATCTGAAGCG CGGCACGGCG AGCGCAATCG CGGCCTCGCA TCTCACCTTT
CAAATCCGCA CTTTCTGGAT CGGCCTGCTA TTCGTCGTCA TCAGCGGCAT TACCATGATC
GTGCTGGTCG GCTGGCTGCT CGGGCTTGCA ACGGTGATCT GGTTTTTGAT CCGGTCCATT
AAAGGCTTCA TGCTTGCCAG CGAAGGCAAG GCCATAGCCG ATCCGGAAAC CTGGCTCTGG
TAG
|
|---|
| Protein sequence | MTDTQPPVAQ PAPGDLDAAK LVYILYFISV VVGITALAGV IFAYLKRGTA SAIAASHLTF
QIRTFWIGLL FVVISGITMI VLVGWLLGLA TVIWFLIRSI KGFMLASEGK AIADPETWLW
|
|---|
| |