| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3235 |
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| Symbol | tig |
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| ID | 5453523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3453756 |
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| End bp | 3455294 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640878825 |
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| Product | trigger factor |
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| Protein accession | YP_001414497 |
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| Protein GI | 154253673 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
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| TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.112931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.882786 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCAGG TCACGGTTAC AAACGCGGAC GGTCTGAAGC GCGAATTGAA GGTTCAGGTC
CCCTCCCAGG AACTTGAAGC CAAACTCGGC GCCAAGTTGG ACGAGATGAA AAATCAGGTC
CGCCTGAAGG GCTTCCGCCC GGGCAAGGTG CCGGTCAGTC ATCTCCGCAA GACCTTCGGC
AAGCAGGTCA TGGGCGACGT CATCCAGGAA ACGGTTGGCG AGTCGAGCCA GCAGGCTCTT
CAGGACGAAA GCCTCCGGCC GGCATTCCAG CCCTCCATCG ACCTCGAAGG CGAAATTCAG
GACGTGCTGG ACGGCAAGGC CGACCTCACA TTCAAGATGA GCTTTGAAGT CATTCCGGCT
TTTGAACTGT CGGACTTTTC AAAGGTTTCG CTCGAACGCC TCACTGCTGA AGTAAAAGAT
GAGGACATCG ACGTCGCGCT GAAGCGCCTC GCCGAGAACC AGAAGAATTT CGAACCGCGT
GAAGAGGGTG CCAAGGCCGA AACCGGCGAC CTGCTGACGA TCGATTTCGT CGGCAAGATC
GACGGCGAAG CCTTTGAAGG CGGTTCCGCT GAAGACGCCA ATCTGGAAAT CGGCTCGGGC
CGTTTCATCC CCGGCTTCGA GGAGCAGCTG GTCGGTGTGA AGGTCGGCGA CGAGACTCAG
GTGAAGGTTG CTTTCCCCGC CGATTACGGC GCCGAGCATC TTGCCGGCAA GGATGCTGTC
TTCGACGTCA AGGTGAAGGA AGTGAAGGCG CCCGCCGAAG TAAAGCTCGA TGACGAGCTG
GCGAAGCGCT TCGGCCTCGA GAGCATGGAG AAGCTGCGCG AGGCGCTTGG CGAGCAGATG
AAGGGCGAAT ATGCCCGGAT GTCCCGCATG CACCTGAAGC GCGCCATGCT GGACAAGCTG
GACGAGCTGC ACAGCTTCGA GCTCCCGCCG ACAATGGTCG AGCAGGAGTT CCAGCAGATC
TGGCAGCAGT TCGAGCACGA GCTGAGCCAC CAGAACAAGA CCGCGGCCGA TCTCGACGAG
CCGGAGGAAG ACGTGCGGGC GGAATACCGC AAGATCGCCG AGCGCCGTGT CCGCCTCGGT
CTCCTCCTTG CCGAGGTTGG CGAGAAGAAC AACATCACCG TGACCGAGCA GGAGCTGAAC
CAGGCTCTCG CCGAGCGCGC TCGCCAGTTC CCGGGGCAGG AGCAGCAGCT CTATCGCTAC
TTCCAGCAGA ACCCGCAGGC CATTCAGGAA CTGCGTGCGC CGATTTTTGA GGACAAGGTC
GTCGACTTCA TCGCGGAACT CGCGAAGGTC GAGGACAAGG TGGTGAGCCG GGACGAGCTC
TTTGCCGATC CCGATGCCGA CGAGCACGAG CATCACCATC ATGACCACGA TCATGATCAT
GATCACGACC ATGACCATGA TCACGGCCAC GATCACGACC ACGGCGACGA GAAGCCGAAG
AAGAAGCCTG CCGCAAAGAA GGCTGCCGCC AAGTCGGACG ACGGCGAGGC GAAGCCCGCC
GCCAAGAAGG CGCCGGCCAA GAAGAAAAAA GAAGACTGA
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| Protein sequence | MMQVTVTNAD GLKRELKVQV PSQELEAKLG AKLDEMKNQV RLKGFRPGKV PVSHLRKTFG
KQVMGDVIQE TVGESSQQAL QDESLRPAFQ PSIDLEGEIQ DVLDGKADLT FKMSFEVIPA
FELSDFSKVS LERLTAEVKD EDIDVALKRL AENQKNFEPR EEGAKAETGD LLTIDFVGKI
DGEAFEGGSA EDANLEIGSG RFIPGFEEQL VGVKVGDETQ VKVAFPADYG AEHLAGKDAV
FDVKVKEVKA PAEVKLDDEL AKRFGLESME KLREALGEQM KGEYARMSRM HLKRAMLDKL
DELHSFELPP TMVEQEFQQI WQQFEHELSH QNKTAADLDE PEEDVRAEYR KIAERRVRLG
LLLAEVGEKN NITVTEQELN QALAERARQF PGQEQQLYRY FQQNPQAIQE LRAPIFEDKV
VDFIAELAKV EDKVVSRDEL FADPDADEHE HHHHDHDHDH DHDHDHDHGH DHDHGDEKPK
KKPAAKKAAA KSDDGEAKPA AKKAPAKKKK ED
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