| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3222 |
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| Symbol | |
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| ID | 5454002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3440427 |
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| End bp | 3441053 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640878811 |
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| Product | NADH-quinone oxidoreductase, E subunit |
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| Protein accession | YP_001414485 |
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| Protein GI | 154253661 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit |
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| TIGRFAM ID | [TIGR01958] NADH-quinone oxidoreductase, E subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.237944 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGCGTAC GGCGACTGGA TCCCAATCAG CCTGCAAGCT TCGCCTTCAC GGCGGAAAAT
GTGGAATGGG CAAAGCAGCA GATTGCGAAA TACCCGGAAG GCAAGCAGGC CTCCGCGATC
ATTCCGCTTC TCTGGCGCGC GCAGGAGCAG CATGACGGCT GGCTGCCCGA GCCTGCGATC
CGCCATGTCG CGGATATGCT CGGCATGGAA TATATCCGCG CCATCGAGGT GGCGACCTTC
TACACCATGT TCAATCTCTC GCCGGTAGGC GAACACTATG TGCAACTCTG TGGCACGACG
CCGTGCTGGT TGCGCGGCGC GGATGAGTTG AAGGAAGTCT GCCGCAAGCA TATCGGCCCG
GAAGGCACGG TAAGCGCGGA TGGAAAATTC TCCTGGCTTG AAGTCGAGTG TCTCGGTGCA
TGCGTCAATG CGCCGATGGT GCAGATCAAT GCCGACTTCT TCGAGGACCT CGATGCGGCG
TCGTTCGAGC GTGTCCTCGC CGATCTCCGT TCCGGCAAGG ATGTGAAGCC GGGACCGCAA
AACGAACGTC ACGCGTCCGA GCCTGCGGGC GGGCTCACCA GCCTCACGAA TGTCGGGCAG
GAAACCGGGA CGGGCGGGGG CAACTGA
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| Protein sequence | MSVRRLDPNQ PASFAFTAEN VEWAKQQIAK YPEGKQASAI IPLLWRAQEQ HDGWLPEPAI
RHVADMLGME YIRAIEVATF YTMFNLSPVG EHYVQLCGTT PCWLRGADEL KEVCRKHIGP
EGTVSADGKF SWLEVECLGA CVNAPMVQIN ADFFEDLDAA SFERVLADLR SGKDVKPGPQ
NERHASEPAG GLTSLTNVGQ ETGTGGGN
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