Gene Plav_3198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3198 
Symbol 
ID5454450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3415542 
End bp3416714 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content49% 
IMG OID640878787 
Producthypothetical protein 
Protein accessionYP_001414461 
Protein GI154253637 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTATA CTAACTCGCA GATGAAGCTC GATCAGCTGA TCGGTTACTT CAACGGAAAG 
AAAATAAATC TAATCCCGCC GTTTCAGCGC GGGCATGTTT GGAAACCGGA GCATCGAAAG
CGCCTGCTGG AAAACATGGT TGCTGGGCGT CCTATACCGG CCATTTTCCT TTATAAAGAG
CCGGCTGGTT CGACCTTCGA ATACAACATT CTTGACGGAA AACAGCGGCT AGAAAGCCTA
ATCCTGTTCA TCGGTTCCAA CAGGAAGGAT ATGAACGTCG CTGGCGTCAA AGACTATTTC
TTTTCTGAAA AAGAGCGTTC TCAAATCCAC TTCCAGATTG AAGTGGATGG CAAAAAGACA
ATGTTCAAGA ATTTGTCGGA TGAAGTCGTG CGTGACTTCA GAGAGTACGC TATCCCGACC
ATAGAAATTG ACCTCGACGA TGAAACGTCG CTCGACGAGA TTATCAACCT GTTTGTCGAC
ATCAACCAAC AGGGTGAGAA GGTAAAAAGA TTCGATATCG TCAAAGCAAT TGGTAAGAAG
AACAAACTTC TATCGAGCGT GTTCGAATTG GTCGCCCAGG AGCAGATCCG CAAGCAAGAC
AAGTACTTCA AGCCTAAAAA CACAGCCTAT TCGCGAGTGC TAGACAAGCT TCAGATAGTA
GAGGCAGCAT CTGACCCCAG TCAGAAAGTT GACCGAATGT GGGAGCGTCT ATTCGAGTTG
GTACTCATGA ACCGAACAGG CAAACATCGT CAACCGAATC AAATTCTGAA GACCTTCATA
AAGGTAGAAA AAGGCGACGA TAGCCACGCT CTGGCGGCGG CAGAAAAAAG AAAGCTTCAA
CGCGTCTTTG CCTTTTTGGA CGTTAGCTAC GACGAAACGC CCCTTGGTGA AAGCCGGCTG
GCACGCGACC TACCACATTT CTATACAATG GTAACAACAC TGCTGTCCTC GGAGTTGCTG
GATGCTGGCG GCGCGGCTCC GGACTATCCA AATGTCCGAC GCAAACTCCT TGCTTTCTCC
AAACTCATCA AGGAGGGCGC AAAGCCCCCG AAAAGCCAAA CGGTAGCGGA AGCTTTAAGT
GAGTACATGG GTGCAGCTGC AAAGCAGACG ACTCATCCGG GGCGGCGCAC GACGAGAGAG
CAAAAATTCT TGGAGATTCT GGACACGCTT TGA
 
Protein sequence
MHYTNSQMKL DQLIGYFNGK KINLIPPFQR GHVWKPEHRK RLLENMVAGR PIPAIFLYKE 
PAGSTFEYNI LDGKQRLESL ILFIGSNRKD MNVAGVKDYF FSEKERSQIH FQIEVDGKKT
MFKNLSDEVV RDFREYAIPT IEIDLDDETS LDEIINLFVD INQQGEKVKR FDIVKAIGKK
NKLLSSVFEL VAQEQIRKQD KYFKPKNTAY SRVLDKLQIV EAASDPSQKV DRMWERLFEL
VLMNRTGKHR QPNQILKTFI KVEKGDDSHA LAAAEKRKLQ RVFAFLDVSY DETPLGESRL
ARDLPHFYTM VTTLLSSELL DAGGAAPDYP NVRRKLLAFS KLIKEGAKPP KSQTVAEALS
EYMGAAAKQT THPGRRTTRE QKFLEILDTL