| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3195 |
|---|
| Symbol | |
|---|
| ID | 5455104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 3409837 |
|---|
| End bp | 3410763 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640878784 |
|---|
| Product | translation elongation factor Ts |
|---|
| Protein accession | YP_001414458 |
|---|
| Protein GI | 154253634 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0264] Translation elongation factor Ts |
|---|
| TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 74 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAA TCACCGCGAG CATGGTGAAA CAACTGCGCG AGACCACTGG CGCAGGCATG
ATGGATTGCA AATCCGCCCT CACCGAAACG GGCGGCGACA TGGAAGCAGC CATCGACTGG
CTGCGCACCA AGGGCCTCGC GAAAGCCGCC AAAAAGGCTG GCCGCGTAGC CGCCGAAGGC
CTTATCGGCG TTGTCGCGAA CGGCACCGCC GGCGCGATCG TCGAAGTGAA TTCCGAAACC
GACTTCGTGG CGCGCAACGA GCAGTTCCAG AAGATGGTGT CCGACATCGC CTCGGCGGCG
CTGTCGGTCG AAGGCGATTT CGACAAGCTC GTCGCCTCGA CCTATCCCGG CTCGTCCAAG
TCCGTTCAGG ACTATGTGAC TGAAATGGTT GGCACAATCG GCGAGAACAT GAGCGTCCGC
CGCGCCGGCT GCATCTCCGT GAGCGACGGC GCCGTGGCGG CTTACGTCCA CAGCCAGGTC
GTTCCCGGCC TCGGCAAGAT CGGCGTGCTG GTCGGATTGG AGTCCAAGGG CGACAAGACG
AAGCTCCTCG AACTCGGCCG CCAGATCGCC ATGCACATCG CCGCGACCAA CCCGCTGGCG
ACCCGCAAGG AAGAGATGGA TCCCGCCCTC GTCGAGCGCG AGCGCAATGT CCTGATCGCG
GAAGCCAAGG AATCCGGCCG TCCCGACAAC ATCATCGAGA AGATGGTCGA GGGCCGCATC
CGCAAGTTCT ACGAGGAAGT CGTCCTCCTC TCGCAGGCCT TCGTCATCAA TCCCGACGAT
ACGGTCGAAA AAGCCGTAAA GGCAGCAGAA GCCGATGTGG GTGCTCCCAT TACGGTCGTC
GGCTTCCTGC GCTTCGCTCT CGGTGAGGGC ATCGAGAAGG AAGAGTCCGA TTTCGCGGCC
GAAGTAGCGG CTGCCGCTCG CGGCTGA
|
|---|
| Protein sequence | MAEITASMVK QLRETTGAGM MDCKSALTET GGDMEAAIDW LRTKGLAKAA KKAGRVAAEG
LIGVVANGTA GAIVEVNSET DFVARNEQFQ KMVSDIASAA LSVEGDFDKL VASTYPGSSK
SVQDYVTEMV GTIGENMSVR RAGCISVSDG AVAAYVHSQV VPGLGKIGVL VGLESKGDKT
KLLELGRQIA MHIAATNPLA TRKEEMDPAL VERERNVLIA EAKESGRPDN IIEKMVEGRI
RKFYEEVVLL SQAFVINPDD TVEKAVKAAE ADVGAPITVV GFLRFALGEG IEKEESDFAA
EVAAAARG
|
|---|
| |