| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3189 |
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| Symbol | |
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| ID | 5454396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3404149 |
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| End bp | 3405327 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640878778 |
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| Product | putative membrane-associated zinc metalloprotease |
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| Protein accession | YP_001414452 |
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| Protein GI | 154253628 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACGCGA TGGATCTGCT AGCAGGGCTT GGCGGCTTTG GAGAGTCTCT CTGGAGCTAC
CTCATTCCTT TCCTGTTTGT TTTGACCGTG GTCGTCTTTT TCCATGAGTT GGGTCACTTC
TCGGTGGCGC GCTGGTGCGG GGTCAAGGTC AGCACCTTCT CCATCGGGTT TGGCCGGGAG
ATTTTCGGCT GGAATGATCG CCACGGCACA CGCTGGAAGG TGAGCTGGAT TCCCCTGGGC
GGATACGTCA AATTCGCCGG TGACGAAAAC GCAGCAAGCA TGCCGAGCCG GGAGCAACTG
GAGCGAACCC CAATTGAAGA GCGCTCCGGG CTCTTTCATT TCAAACCGTT GCATCAGCGT
GCTGCCGTTG TGGCGGCGGG GCCCATCGCC AATTTCATTC TGGCGACGGT GATTTTCGCC
TGCATCTTCA CCTTTCTCGG TCGCAGCATC GCGACGCCGG TGGTGGATGA AGTCAGGCCG
GACAGCGCCG CTGCTGCGGC TGGATTTGTG GCGGGCGACC GGATTGTCGC GATCGACGGA
TCGCCGATCG CCAGCTTCGA GCAGATGCAG CGCATTGTTA CGGGCAATGG CGGTGCCGAA
CTCCGCTTTG ATGTCGCGCG AGGCGAAGAA ACGGTCGCGC TGACGGCTGT ACCTGAGGTT
CAGGAAGTTA CCGACCGTTT TGGAAATGTG CATCGCATAG CCATGCTGGG CATCGTGCGT
CACGTCGATA GCGGCAATGT TGAGGTTGTG CGAAGCGACC CGGTAACTGC GCTTTGGCTA
GGGGCCAAGG AAACCTGGTT CGTGGCCGAA CGCACCCTCA GCTATATCGG TGGCATTTTC
ACCGGAACCG AAGATCCAGA TCAGTTGGGC GGCCCCTTGC GCATTGCGCA GGTTTCAGGT
CAGGTCGCCA CTATCGGCTT CGCGGCGCTC ATCAGTATGA CCGCGATGCT CTCTGTAAGT
ATCGGGCTTT TGAATTTGTT TCCGGTGCCG ATGCTCGATG GCGGTCATCT TCTGTATTAC
GCCGTAGAGG CGGTTCGCGG ACGTCCGCTG GGCGAACAGG CACAAGAATA TGGATTCAGG
ATCGGTCTGG CGCTCGTCAT GATGTTGATG GTATTCGCCA CATGGAACGA CCTGGTTCAT
CTGCAGGTCT TTTCATTTTT GAGTGGACTA TTCAGCTGA
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| Protein sequence | MNAMDLLAGL GGFGESLWSY LIPFLFVLTV VVFFHELGHF SVARWCGVKV STFSIGFGRE
IFGWNDRHGT RWKVSWIPLG GYVKFAGDEN AASMPSREQL ERTPIEERSG LFHFKPLHQR
AAVVAAGPIA NFILATVIFA CIFTFLGRSI ATPVVDEVRP DSAAAAAGFV AGDRIVAIDG
SPIASFEQMQ RIVTGNGGAE LRFDVARGEE TVALTAVPEV QEVTDRFGNV HRIAMLGIVR
HVDSGNVEVV RSDPVTALWL GAKETWFVAE RTLSYIGGIF TGTEDPDQLG GPLRIAQVSG
QVATIGFAAL ISMTAMLSVS IGLLNLFPVP MLDGGHLLYY AVEAVRGRPL GEQAQEYGFR
IGLALVMMLM VFATWNDLVH LQVFSFLSGL FS
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