| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3166 |
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| Symbol | |
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| ID | 5454252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3377858 |
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| End bp | 3378610 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640878755 |
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| Product | Triose-phosphate isomerase |
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| Protein accession | YP_001414429 |
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| Protein GI | 154253605 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.136531 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.155629 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACGCG TCAAGGCGCT GGTGGCGGGC AACTGGAAGA TGAACGGGCT GAAGGCCTCG
AAGAAGGAAC TGACCGCGCT CGCGAAAAAG CTCGGCAAGG AAAAGCCTGG CTGCGACGTG
CTGATCTGCC CGCCGGCGAC ATTGATCGCC ACGCTGAAGG ACGCAGCGAA GGGCACCAAG
ATCGCCATTG GCGGCCAGGA CTGCCATGCG AAGGAGAGCG GCGCCCATAC CGGCGATGTG
TCGGCGGAGA TGCTGAAGGA TGCGGGTGCG TCCTATGTCA TCGTCGGCCA TTCGGAGCGC
CGCGCCGATC ATGGCGAGAC GGACGCGGAT GTGAAGGCGA AGGCGGAAGC CGCGCACCGC
GCCGGGCTCG TCGCGATCGT GTGTGTGGGC GAGACGGAAG CGCAGCGCGA CGCGGGCGAG
ACGCTGAAAA TCATCAAGGG CCAGCTCAAG GGCTCGCTTC CCGCCGGTGC GACGGCGAAG
ACGACCGTCA TCGCCTATGA GCCGGTCTGG GCGATCGGCA CCGGCCGCAC GCCGACGGCG
GACGACGTGG CCAAGGTCCA TGCCGCAATC CGCAAGGCGC TCGACGCCCG CTTCGGCGCG
GAAGGCGCGA AGATGCGCAT TCTCTATGGC GGCTCGGTGA AGCCCTCGAA CGCGGCCGAA
TTGATGGCGG TGCCGAACGT CAACGGCGCG CTGGTCGGCG GCGCGAGCCT CAAGGCGGAG
GATTTCTGGG GGATCGTCTC TGCCTACGCC TGA
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| Protein sequence | MARVKALVAG NWKMNGLKAS KKELTALAKK LGKEKPGCDV LICPPATLIA TLKDAAKGTK
IAIGGQDCHA KESGAHTGDV SAEMLKDAGA SYVIVGHSER RADHGETDAD VKAKAEAAHR
AGLVAIVCVG ETEAQRDAGE TLKIIKGQLK GSLPAGATAK TTVIAYEPVW AIGTGRTPTA
DDVAKVHAAI RKALDARFGA EGAKMRILYG GSVKPSNAAE LMAVPNVNGA LVGGASLKAE
DFWGIVSAYA
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