| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3123 |
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| Symbol | |
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| ID | 5454716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3333695 |
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| End bp | 3335119 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640878713 |
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| Product | GTP-binding protein HSR1-related |
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| Protein accession | YP_001414387 |
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| Protein GI | 154253563 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2262] GTPases |
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| TIGRFAM ID | [TIGR03156] GTP-binding protein HflX |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.406927 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACTGAAG AACCCAAGGA AGAAGGCGCC GAAAAGCGCG GCGAGCGTGG CTTTCGAGTG
AAGCCCGCCG AGTTGACGCG CGCTTTCGTG GTTGTGCCCT GGCTCAAATC CGTCGCGAAG
CAGGCAAAGA GAGGAGGGGG CGGACGTTCC CCCGAATCCC GTCTGGACGA GGCCGTCGGT
CTCGCTGCCG CCATTTCGCT GAACGTTGTG GGAAGCGTCG TTGTCCCGCT TGCGAGCCCG
CGGCCGGCAA CGCTTTTCGG CGAAGGCAAG GTCGACGAAA TCAAGGGTCA GATTGCGGAA
CTTCGGGTCG ATCTCGTCAT CGTCGACGGG GCCCTCGGTC CGGGTCAGCA GCGCAATCTC
GAAAAAGCCT GGAACGTGAA GGTGCTCGAC CGCACCGGTC TTATCCTCGA AATCTTCGGC
GAGCGTGCGC GAACGCGCGA AGGCTCGCTC CAGGTTGAAC TGGCGCATCT CAATTATCAG
AAGAGCCGCC TCGTCCGCAG CTGGACCCAT CTGGAGCGTC AGCGCGGCGG CTTCGGCTTC
CTCGGCGGCC CCGGCGAAAC GCAGATCGAA GCCGACAGGC GCCTCATTCA GGAGCGCATC
GCGAAAATCG AGCACCAGCT CGAAACCGTG AAACGGACGC GCGAACTTCA TCGCAAGAAG
CGCCGCGAGG CGCCATATCC GATTGTCGCG CTGGTCGGCT ATACCAATGC CGGCAAGTCG
ACTCTGTTCA ACCGGCTTAC GGAAGCCGGA GTCTTCGCCG AAAACCTTCT CTTCGCGACG
CTCGACCCGA CAATGCGCGC CCTCGTTCTC CCGAGCGGCC GCAAGATCAT CCTGTCGGAC
ACAGTGGGCT TCATTTCGGA CCTGCCGACG CATCTCGTCG CCGCCTTCCG CGCCACGCTC
GAGGAAGTTC TGGAAGCCGA AGTGATCCTG CATGTCCGCG ACGCCGCGCA TGAGGAAACC
GCGATCCAGA AGACGGATGT CGAAAAAGTT CTGACCTCGC TCGGCGTCAC CAGGGAAAGC
ACAGCGGCGA ACGGTCAGCA CGTCGTGGAC GTCCTGAACA AGATTGACCT GCTGGAAGGC
GAGTTCCGCG ACGCCGCCGT CAATCTCGCC ATGCGCGAGC CGATGACGGT TGCCGTCTCC
GCCCTGACCG GCGACGGAAC GGAAAACCTC CTTAACCTCA TCGACAGCCT GATCGTCGAT
GACGAACGGC CCGTACATTT CGATGTGCCG GCGAATGAGG GAGAGGCCAT CGCCTGGCTT
CACGCCAACG CGCATATCCG CAACCGTGTC GATGGAGACG AGGGCATCGT CCATCTCGAT
CTCGGCTTGA CCCCCATCGT TGCCGGCCGT TTCGAAAAGC GGTTCCCGGC GCTCGCCCGG
CAGCTCGGTG AAGCCGCCGC TGCGGCCGCA GCTGCGGCGG AATAG
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| Protein sequence | MTEEPKEEGA EKRGERGFRV KPAELTRAFV VVPWLKSVAK QAKRGGGGRS PESRLDEAVG
LAAAISLNVV GSVVVPLASP RPATLFGEGK VDEIKGQIAE LRVDLVIVDG ALGPGQQRNL
EKAWNVKVLD RTGLILEIFG ERARTREGSL QVELAHLNYQ KSRLVRSWTH LERQRGGFGF
LGGPGETQIE ADRRLIQERI AKIEHQLETV KRTRELHRKK RREAPYPIVA LVGYTNAGKS
TLFNRLTEAG VFAENLLFAT LDPTMRALVL PSGRKIILSD TVGFISDLPT HLVAAFRATL
EEVLEAEVIL HVRDAAHEET AIQKTDVEKV LTSLGVTRES TAANGQHVVD VLNKIDLLEG
EFRDAAVNLA MREPMTVAVS ALTGDGTENL LNLIDSLIVD DERPVHFDVP ANEGEAIAWL
HANAHIRNRV DGDEGIVHLD LGLTPIVAGR FEKRFPALAR QLGEAAAAAA AAAE
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