| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3115 |
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| Symbol | |
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| ID | 5454045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3326295 |
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| End bp | 3327113 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640878705 |
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| Product | beta-lactamase-like protein |
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| Protein accession | YP_001414379 |
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| Protein GI | 154253555 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.402166 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.647891 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATGC GGGCGACGAT ACTCGGCTCC GGCTCCTCCG GCGGCGTGCC GCGCATCGGC
GCGGGCGGCG GCTTCTGGGG CGCCTGCGAC CCGAAGGAGC CGAAGAACCG GCGGCGTCGC
TGCTCGCTGC TGATCGAGCA ATGGGACCGC GACCCGACCG CGAAGACCGT GGTGCTGGTG
GATACGGCGC CCGAGATGCG CGACCAGCTT ATCGACGCGG ATACGGGCTG GGTCGATGCG
GTGCTCTTCA CGCATGACCA TGCGGACCAG TGCCACGGCA TCGACGATTT GCGGATGGTG
GCGCTGAACA AGCGGCGGCG CGTGGACTGC TGGATGGATG CGGCGACGCA TGACACGCTG
ATGACGCGCT TCGGCTATTG CTTCCGGGAG AAGCCGGGCT CGGGCTATCC GGCCATTCTC
AACGATCACC TGATTTCGCG GAGCGGCCAG GAGATCGTTA TCGACGGGCC GGGCGGACAA
GTGAGGGCGG TCGCCTTCGA CCAGGATCAC GGCAATATCC GTTCGCTCGG TTTCCGCTTC
GGGCCACTCG CCTATTCGGC CGATGCGGTG GGCATACCGG ATGAGAGTTT CGCGCTAATC
GACGGAATAG ATTGCTGGAT CGTCGATGCG CTGCGCTATG CGCCGCACCC GACCCATGCA
CATGTCGAGA TGGCACTCGA CTGGCTGAAG CGCGCCGGCA CGAAACATGG CGTACTGACG
AACCTTCATG TCGATCTCGA TTATGCGAAG CTGAAGGCGG AGCTGCCTGA AGGCGTCGAG
CCGGGCTATG ACGGGATGCG GCTCGAATTC GAGTTCTGA
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| Protein sequence | MKMRATILGS GSSGGVPRIG AGGGFWGACD PKEPKNRRRR CSLLIEQWDR DPTAKTVVLV
DTAPEMRDQL IDADTGWVDA VLFTHDHADQ CHGIDDLRMV ALNKRRRVDC WMDAATHDTL
MTRFGYCFRE KPGSGYPAIL NDHLISRSGQ EIVIDGPGGQ VRAVAFDQDH GNIRSLGFRF
GPLAYSADAV GIPDESFALI DGIDCWIVDA LRYAPHPTHA HVEMALDWLK RAGTKHGVLT
NLHVDLDYAK LKAELPEGVE PGYDGMRLEF EF
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