| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3087 |
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| Symbol | |
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| ID | 5455507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3296746 |
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| End bp | 3298326 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640878676 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001414351 |
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| Protein GI | 154253527 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.789973 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.153239 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTCGT ACAAACGCGG GATCATGCCC CTGCCCGCAC CTCACATCGC TCGCGGCTAT
ACCGGCGAGC CCGCGCCTGA GCGCCTCAAC ATCGCCCGCT ATTGCCTGGC ACGCGCAGCG
GCGGAGACGC CTGATAAGAC GGCGCTGCTC GTCGTGTCGG ACGCCGATGC ACCCCTCGAC
GCGGCGGAGT GCTGGAGCTA TGGCGCGCTG GACGATGCCG TACGGCGCGT GGCGGCCGGG
CTGCTTGCGG AAGGCTTCAG GCCGGGCGAG CGGTTGATGA TCCGTATGCC GAATACATCC
GAATATGCAT TGATGTTTTT CGGCGCATTG GCGGCAGGTC TTGTGCCCCT TCCTTCATCG
TCGCAGCTGA CGCCCGCCGA GGCAGACTTC CTGCTGCAGG ACTCTGCCGC CTCCGCGGTG
GCGCTGGCTC CGGGGATGAC GATGCAAGCA AGCGGCAGAC GCGTGATAGA CGAGGCAATG
CTGGCACGGC TGAAGCTTCA TCCGCCGCTC GATGCCTATG CCGATACCGG GGCAAACGAC
CCGGCCTTTC TCGTCTATAC ATCCGGCACC AGCGGAAAGC CGAAAGGCGT GCTGCATGCG
CATCGTAGCG CCTGGGGACG CAGGCCCATG TACAAGGGCT GGTATGGCAT CGAGGCAGAC
GACGTCATGT TGCACGCCGG AGCCTTCAAC TGGACTTATA CGCTGGGCGT CGGCCTGACC
GATCCCTGGG CGAATGGTGC GACGACCGTT CTCTACAACG GCGAAAAGGA CGTGGCCGTC
TGGCCAAAGC TGATGGCAAA GACCGGCGCA ACTCTTTTTG CGGCTGTCCC GACGCTTTAC
CGGCAAATCC TGAAATATTG CGACCTGTCT TCCTTCGATC TCTCCAGGCT GAGGCACGGA
CTGACCGCCG GGGAAGCTCT GTCGGCCACA CTGCTGGACC ACTGGCGCGA AGCAACTGGG
AAAGAATTAT ACGAGGCGCT CGGCATGAGC GAATGCTCGA CCTATGTTTC GACCGCGCCC
GGCATGGAAA TCCGCATCGG CAGTCCCGGA CGGCCGCAAC CAGGACGCTG CGTGGCGGCG
CTGCCGGTGG AAGGCGGGAC GGAACCTCTG CCTGCCGGCA ATGTGGGATT GTTGGCGGTG
CACCGCTCCG ACCCCGGATT GATGCTCGGC TATTGGCGGC GGCCGGACGA GGAAGCAGAA
GTCTATCGTG GCGAATGGTT CATCGGCGGC GATCTCGCGA GCTTCGATGA AGACGGCTAC
ATGCACTATC ACGGGCGCGC CGACGACCTG ATGAATGCCA TGGGATACCG CGTTTCGCCG
CAGGAAGTGG AAGCCGCGCT GGCCACCCAC CCTGACGTGC AGGAAGTGGC GGTGACGGAG
ATACATGTGC GCGAGGATGT TTCGATCATC GCGGCCTTTG TCGTGCCGAA AGAAGCGAGC
GAACCGGATG CGGCCGCTAT TCTCAAATGG GGCGCGGAGC GTCTTGCCGC TTATAAATGT
CCCAGGGAAA TCATATTTGT CGACACCCTG CCCCGCACCG CGAACGGCAA GGTCATGCGC
CGCACATTGG CACGCAAATA A
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| Protein sequence | MRSYKRGIMP LPAPHIARGY TGEPAPERLN IARYCLARAA AETPDKTALL VVSDADAPLD
AAECWSYGAL DDAVRRVAAG LLAEGFRPGE RLMIRMPNTS EYALMFFGAL AAGLVPLPSS
SQLTPAEADF LLQDSAASAV ALAPGMTMQA SGRRVIDEAM LARLKLHPPL DAYADTGAND
PAFLVYTSGT SGKPKGVLHA HRSAWGRRPM YKGWYGIEAD DVMLHAGAFN WTYTLGVGLT
DPWANGATTV LYNGEKDVAV WPKLMAKTGA TLFAAVPTLY RQILKYCDLS SFDLSRLRHG
LTAGEALSAT LLDHWREATG KELYEALGMS ECSTYVSTAP GMEIRIGSPG RPQPGRCVAA
LPVEGGTEPL PAGNVGLLAV HRSDPGLMLG YWRRPDEEAE VYRGEWFIGG DLASFDEDGY
MHYHGRADDL MNAMGYRVSP QEVEAALATH PDVQEVAVTE IHVREDVSII AAFVVPKEAS
EPDAAAILKW GAERLAAYKC PREIIFVDTL PRTANGKVMR RTLARK
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