Gene Plav_3075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3075 
Symbol 
ID5455655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3283508 
End bp3283891 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content57% 
IMG OID640878664 
Producthypothetical protein 
Protein accessionYP_001414339 
Protein GI154253515 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.168163 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.328102 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGACC AGCCCACAGC AAAGGAACTT ATCGAGGCGG TCGCTGACTT TATCCGCAAT 
CACGCCATGC CTCAGCTGCA AGGCCACGCA GCGTTCCACG CGCGTGTAGC CGCCAATGCA
CTGGACATCG TGAAGCGCGA GCTCGAAGTG GCTCCCGCCG CTAACTCTGA TGAAATCTCG
CGACTGACGG AATTGCTCGG CCATGGCGGC TTGCTGGAAG ATTTAAACCG GGAGCTGTGC
GAGAAAATCG AACAGGGACA GATCGGGCTC GATACGCCGG GACTGGCTGA CCACCTTTGG
AAGACAACAC TTACAAAGCT CTCCATCGAT CAGCCCAACT ATTCGGGCTA TCGGCGGGCA
ATTGAGGAAT TGGGCGGGGG ATAA
 
Protein sequence
MQDQPTAKEL IEAVADFIRN HAMPQLQGHA AFHARVAANA LDIVKRELEV APAANSDEIS 
RLTELLGHGG LLEDLNRELC EKIEQGQIGL DTPGLADHLW KTTLTKLSID QPNYSGYRRA
IEELGGG