Gene Plav_3048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3048 
Symbol 
ID5455889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3251983 
End bp3252840 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content66% 
IMG OID640878636 
Producthypothetical protein 
Protein accessionYP_001414312 
Protein GI154253488 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCGCA TCGTCGAGAC CTTGAGCGAC CCCGGCAATC CGGACAAGGC GAATGAAGAC 
GCCTTCGGTC ATGCCGGCGC CCATGCCTGG GTGATCGACG GCGCGACCGA TGTCGCCGAC
GGTCCGCTGA TCGGCTCTGA GACCGGGGCG CACTGGCTTG CGCGGGAGGC GAGTGCGCTC
TTCGCTGCCC ATGCCGCGCG TTATGGCGCC GATCTTCACG GCCTTGTCCG TTTCACCATC
GAGACGCTGG CGCTTCGCTT CGAGCAGGAA CGTCTTCGCC CGCCGAACGG GCGCCACGAA
TGGCCGAGCG CGGCCATGGC GCTTCTCCAC GCCGGCGAGG GAAAGCTCGC CTGTGCGAAC
TTCGCCGATT GCGGCCTTAT CCTTCTCGAC GATGACAGCG GCGAGGCGCG GGTCTTCGGT
GTGCAGCACA CCTCGCGCGA GGCGCGGGCC GTGAGCCGCA CGGCGGAACT GATCGCCGCG
CTCGCATCCG GCGAGAAGCC TTTCGACAAT GAAGCCATCA TGGCCTATCT GCGCGAAAGC
CGTCGCCGCC AGAACACGGA AGAGGGATAC TGGATCCTCG GCATAGACCC GAAAGCCGTC
TCCCATATGC GCCATTGGGA CATTCCGCTC TCGCGCCCCG TCACCGGCCT TCTCTTCAGC
GACGGGTTCG GCTCCATCGT CTTCGACTAT CACCGCATGG ACCCGGCGGC GCTGGTGCGC
CGTGCCGCGC TTGGCGGCCT CCGCTCCATC GCTGACGAGG TTCGTCGCAT CGAGGCAATG
GAGGATCCCG ACTGTCTCGA ACACCCCCGG TTCAAGCGCC ATGACGACGC GACGGCGGTC
CTTTTCCGCG TCGAATGA
 
Protein sequence
MLRIVETLSD PGNPDKANED AFGHAGAHAW VIDGATDVAD GPLIGSETGA HWLAREASAL 
FAAHAARYGA DLHGLVRFTI ETLALRFEQE RLRPPNGRHE WPSAAMALLH AGEGKLACAN
FADCGLILLD DDSGEARVFG VQHTSREARA VSRTAELIAA LASGEKPFDN EAIMAYLRES
RRRQNTEEGY WILGIDPKAV SHMRHWDIPL SRPVTGLLFS DGFGSIVFDY HRMDPAALVR
RAALGGLRSI ADEVRRIEAM EDPDCLEHPR FKRHDDATAV LFRVE