| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3010 |
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| Symbol | |
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| ID | 5455283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3212320 |
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| End bp | 3214050 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640878598 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001414274 |
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| Protein GI | 154253450 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.496774 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCCA AGACATTCGA CAAATCGAAA CTGCCGAGCC GCCACGTCAC GGTCGGGCCG
GAGCGCGCGC CGCACCGGTC CTACTACTAT GCGATGGGCC TCACCGAGGA AGAGATCAAT
CAGCCCTTCG TCGGCGTGGC GACCTGCTGG AACGAGGCGG CTCCCTGCAA CATCGCGTTG
ATGCGTCAGG CGCAGTCGGT GAAGAAGGGT GTCAAGGCCG CCGCCGGCAC GCCCCGCGAA
TTCTGCACCA TCACGGTGAC GGACGGCATC GCCATGGGCC ACCAGGGCAT GAAATCCTCG
CTCGCCAGCC GCGACGTGAT CGCGGATTCG GTCGAGCTCA CCATGCGCGG TCATTGCTAC
GACGCGCTGG TCGGCCTTGC CGGCTGCGAC AAGTCGCTGC CGGGCATGAT GATGTCGATG
GTTCGTCTCA ACGTCCCCTC CGTCTTCATG TATGGCGGCT CGATCCTGCC GGGCCATTTC
AAGGGCAAGG ACGTCACCGT GGTCGACGTC TTCGAGGCGG TCGGCCAGCA CTCGGCGGGC
AACATGGAAG ACGAAGAGCT GCATGCGCTC GAATGCGTCG CCTGTCCCTC CGCCGGCGCC
TGCGGCGGCC AGTTCACGGC CAACACCATG GCCTGCGTTT CGGAAGCCAT GGGCCTCGCG
CTGCCGGGTT CGGCGGGCGC GCCTGCGCCT TATGAGAGCC GCGACGAATA TGCGGAAGCC
TCGGGCCGCG CCGTCATGCA CCTCCTCGCC AACAACATCC GGCCGCGCGA CATCGTCACG
CGCAAGGCGC TCGAGAATGC CGCCGTCATC GTCGCGGCGA CGGGCGGTTC GACCAATGGC
GGGCTTCATC TCCCGGCCAT CGCGCATGAA GCGGGCATCG ATTTCGACCT GATGGAAGTC
GCCGAAATCT TCAAGAAGAC GCCCTACATC ACCGACCTGA AGCCCGGCGG CAATTACGTC
GCGAAGGATC TTCACGAGGC GGGCGGCGTT TCGATGGTCC TCAAGGTGCT GCTCGATGGC
GGCTATCTCC ACGGCGATTG CCTCACCGTC ACCGGCCAGT CGCTCGCAGA CAACCTCAAG
GACGTGAAGT TCAACCCGGA CCAGAAGGTC GTCTATCCGC TGTCCAATCC GCTCTCGCCC
ACCGGCGGCG TTGTCGGGTT GCAGGGCTCG CTCGCGCCGG ATGGCGCCAT CGTCAAGGTC
GCGGGCATGG AGAAGGATCA TCTCCGTTTC TCCGGTCCGG CGCGTTGCTT CGACAGCGAA
GAGGAATGCT TCGAGGCGGT CGACAAACGT CAGTACAAGG AAGGTGAGGT TCTCGTCATC
CGCTACGAGG GACCGAAGGG TGGCCCCGGC ATGCGCGAAA TGCTCTCCAC CACCGCCGCG
CTTTACGGCC AGGGCATGGG CGACAAGGTC GCGCTCATCA CCGATGGCCG CTTCTCCGGC
GGCACGCGCG GTTTCTGCAT CGGCCATGTC GGCCCGGAAG CCGCCGTCGG CGGCCCCATC
GCGCTGATCG AGGATGGCGA CATCATCACC ATCGACGCGG AGAACGGCAC CATCGATCTC
GAAGTCGACG AAGCCGTGCT CGAAAAGCGC CGCGCGAACT GGAAGCCCCG GGAGACCATG
TACGCCTCCG GCGCGCTGTG GAAATACGCG CAGCTCGTCG GCACCGCCCG CAAGGGCGCC
GTCACCCATC CGGGCGGCAA GGCGGAGAAA CATGTCTATG CGGATATCTG A
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| Protein sequence | MDAKTFDKSK LPSRHVTVGP ERAPHRSYYY AMGLTEEEIN QPFVGVATCW NEAAPCNIAL
MRQAQSVKKG VKAAAGTPRE FCTITVTDGI AMGHQGMKSS LASRDVIADS VELTMRGHCY
DALVGLAGCD KSLPGMMMSM VRLNVPSVFM YGGSILPGHF KGKDVTVVDV FEAVGQHSAG
NMEDEELHAL ECVACPSAGA CGGQFTANTM ACVSEAMGLA LPGSAGAPAP YESRDEYAEA
SGRAVMHLLA NNIRPRDIVT RKALENAAVI VAATGGSTNG GLHLPAIAHE AGIDFDLMEV
AEIFKKTPYI TDLKPGGNYV AKDLHEAGGV SMVLKVLLDG GYLHGDCLTV TGQSLADNLK
DVKFNPDQKV VYPLSNPLSP TGGVVGLQGS LAPDGAIVKV AGMEKDHLRF SGPARCFDSE
EECFEAVDKR QYKEGEVLVI RYEGPKGGPG MREMLSTTAA LYGQGMGDKV ALITDGRFSG
GTRGFCIGHV GPEAAVGGPI ALIEDGDIIT IDAENGTIDL EVDEAVLEKR RANWKPRETM
YASGALWKYA QLVGTARKGA VTHPGGKAEK HVYADI
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