| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2996 |
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| Symbol | |
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| ID | 5456397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3194561 |
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| End bp | 3195940 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640878583 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001414260 |
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| Protein GI | 154253436 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.143417 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCTG ACACCCTGCC GCTACCGCTG AGGCGGATCG GCGAGGCGAT CTCCTCGCGG
CTCGCCGATG CTCACCTTGC GGGCGTCGTG CGCGGGGCCG CGTTCGTCAT GGGCATCCGC
GTTGCGGGCG CCGGTATTGC GCTTCTCAGT CAGGTTCTGC TCGCCCGCTG GATGGGTGCT
TTCGAATACG GCATCTTCGC CTATGTCTGG GTCTGGGTCG TCATCCTCGG CATCGTCGTG
CCGATGGGTT TCGGCACCTC GGTTTTGCGT TTCGTGCCCG AGTACCGGAC GAAGGAACGG
TGGCGGCGTC TCGCGGGCGT TCTCCGCGCT TCGACCTTCG TCGTGCTCGC GCTCGGGCTC
GTCACGGCGC TGCTCGGCGT CGCCTTGCTC TGGGCTGTGC GCGATCACGT CGAGAGTTAT
TATTTCCTGC CTCTGGTGGT GGCGCTTCTC TGCGTTCCCG CCTTCGCGCT CACCGATTGG
CAGGAGGGCG CCGCGCGCGC CTTTGGGTGG GTCAACCTCG CCTATATCCC GTCCTACATC
ATTCGTCCGC TCGGCATCGT GCTGATCGCC GGCGGCATCG TGCTTTTCAC CGGTCAGGCG
ACGGGCCTGC AGGTCACGCT CGGCGCGCTC GGCGCCACGC TTCTCACCCT TGTGGCGCAG
CGCCTTTTCC TTTCGCGCCG GGTGGCGCGC ACAGTGCCGC CTGCGCGGCC GGTCTATCAT
CTCCGTCACT GGGTCGCGAT TTCGGCGCCG CTGGTGCTGG TGGAAGGTCT CTTCCTCATC
CTCGTCAACA CGGACATCGT TTTGCTCGGC TATTTCGTCG AGCCAGACCA GATCGCCGTT
TATTTTGCGG CCACGCGCAT CGCAAACCTG ATGGCGTTTA TCTGCTTCTC GCTCTCGGCG
CTCGCAGTGC CGAAATTCGC CGAGCTGCAT GGGGCGGGCA AGCGCGAGGA GTTGCAGACC
TTCATGCAGG GCGTCATCCA GTGGATCTTC TGGCCGACGC TTGCCGCTGG TGTTTTCCTG
TTGCTGATCG GTCCTTTTGC GCTCGGCCTT TTTGGCGAAG GCTTCGAGGC GGGCTATCCG
CTGCTCTGGC TTCTGACGCT CGGCTTTCTT GCGCGTGCCT CGACCGGGCC GACTGAGTAT
CTGCTCAACA TGACCGGCCA CCAGAATGCG GTTGCCTGGG TCTATGGTGC TGCCGCTGTC
GGAAACATTG TTCTCAACAT CGCGCTCGTT CCCTCGTTCG GGCTTATGGG CGCCGCCGCC
GCCACCGCCA TCACGATCGT CGGCTCGACG GTTTGTCTGG CGGTCATCGT GCGCCGCCGT
CTCGGTATCA CCGCTTTTGT TCTTGCCGGC GTGCCGCGCC GCTTGCTGGC GGCTGCGTAA
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| Protein sequence | MKPDTLPLPL RRIGEAISSR LADAHLAGVV RGAAFVMGIR VAGAGIALLS QVLLARWMGA
FEYGIFAYVW VWVVILGIVV PMGFGTSVLR FVPEYRTKER WRRLAGVLRA STFVVLALGL
VTALLGVALL WAVRDHVESY YFLPLVVALL CVPAFALTDW QEGAARAFGW VNLAYIPSYI
IRPLGIVLIA GGIVLFTGQA TGLQVTLGAL GATLLTLVAQ RLFLSRRVAR TVPPARPVYH
LRHWVAISAP LVLVEGLFLI LVNTDIVLLG YFVEPDQIAV YFAATRIANL MAFICFSLSA
LAVPKFAELH GAGKREELQT FMQGVIQWIF WPTLAAGVFL LLIGPFALGL FGEGFEAGYP
LLWLLTLGFL ARASTGPTEY LLNMTGHQNA VAWVYGAAAV GNIVLNIALV PSFGLMGAAA
ATAITIVGST VCLAVIVRRR LGITAFVLAG VPRRLLAAA
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