Gene Plav_2988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2988 
Symbol 
ID5456964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3185043 
End bp3185561 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content61% 
IMG OID640878574 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001414252 
Protein GI154253428 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.885762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.907931 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGAAGA AGCACAAAAC GACCGTCACT CACCTCGAAA TGACGGCCGA GCCGCGCTTG 
CCGCCAGTGC CGCGGCCTCG CGGAAAATAT GCATTGATGC GTGCAGACAA GCCGCCGGTG
CACTTCTACC GCTACCTCTA CGATACGATC GGCCGGAACC ACGTCTGGGT GAACCGCAAG
CGTCTCTCCG ATGCGGCGCT CGCCATCATC ATCCAGCATG AGGAAGTCGA GATTTACGTG
CTCTATTGCG GTGGCGTGCC TGCTGGATAT TTCGAGCTCG ACTTCCGCGC CATGCCGCGC
GTCGAACTCT CGTTTCTGGG CGTGATGCCG GAGCATATCG GTAAAGGTCT TGGCCGGTTT
CTCCTCGGCG AAGCAATCGC GCTCGCTTGG GGCCGCCATC CCAACCGTCT GATCGTGCAG
ACCTGCACAC TCGACCACCC GCGCGCCCTG CCCCTCTACC AGCGTTTCGG CTTCTCGCCC
TGCGGACAGG AGGAAGTCGA ACTGGAGGAG CTGGACTGA
 
Protein sequence
MGKKHKTTVT HLEMTAEPRL PPVPRPRGKY ALMRADKPPV HFYRYLYDTI GRNHVWVNRK 
RLSDAALAII IQHEEVEIYV LYCGGVPAGY FELDFRAMPR VELSFLGVMP EHIGKGLGRF
LLGEAIALAW GRHPNRLIVQ TCTLDHPRAL PLYQRFGFSP CGQEEVELEE LD