| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2966 |
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| Symbol | |
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| ID | 5456594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3164859 |
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| End bp | 3166364 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640878550 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_001414230 |
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| Protein GI | 154253406 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.278298 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATA CGACCGCCCT CCTGATCGCT CTCGGCCTGC CGGCTGCGGC GACCTTTATG
ATCGCCGCTC TCGGCAGCCG TCCCAATCTG CGCGACGCCA CCAGCGTCAT CGCGTCCCTC
CTGACTTTCG CCGTCGTCCT CTACCTGCTG AATGGCTTTC TCGACGGAGC GCGTCCTTCG
ATCACTCTTT TCGAGGTCAT GCCGGGACTG GTCGTGAATT TCGCGATAGA GCCGTTAGGG
ATGCTCTTCG CGACGGTTGC CTCCGGCCTC TGGATCGTGA CGGCCATTTA TTCGATCGGC
TATATGCGCG GCGCCGGCGA AAAGAAGCAG ACGCGCTTCT ATATCTGCTT CGCCATAGCG
ATCTCGGCCG CACTCGGCAT CGCCTTCTCC GGCAACCTTT TCACGCTCTT CATTTTCTAC
GAAGTGCTGA CCATCTCGAC CTATCCGCTG GTCGCCCACA AGGAAACGCC GGAAGCGCGG
CGAGGCGCGC GTATATACCT GGCGATCCTG ATGACCACGT CGATCCTATT CCTGCTGGTC
GCCGTCATCT GGACATGGAA TCTGGCGGGC ACGATGGATT TCCGCCCCGG CGGAATTCTG
GAAGGCCGGA TCGATCCGGC CTACGTGCCG CTGCTGCTCG CACTCTTCGC CTTCGGCATC
GGCAAGGCAG CTCTGATGCC GTTCCATCGC TGGCTTCCTG CCGCCATGGT CGCGCCCACG
CCCGTCAGCG CCTTGCTGCA CGCGGTGGCG GTCGTGAAGG CCGGCGTCTT CACGATGCTC
AAGGTGGGCA CCTATATTTT CGGGGTCGGT TTTCTCTCTC GCACCGGCGC GGCTGAATGG
CTTGTCTGGC TTGCCGCGGC GTCGATCCTC ATTGCCTCCA TCATCGCCCT CACCAAGGAC
GATTTGAAGG AGCGTCTCGC CTACTCGACC GTCAGCCAGC TCTCCTACAT CACCCTCGGC
ATGGCGCTCG CAAATCAGAT GGGCGTCGTG GGTGGCGGTA TGCATATCGT CATGCATGCT
ATGGGCAAGA TCACACTTTT CATGTGCGCC GGTGCCATCT ACGTCGCAGC TCACAAGACG
AAGGTCAGCG AGCTCGACGG TCTCGGCCGC AAGATGCCTT TCACCTTCAT CGCCTTCACA
CTCGCATCCC TGAGTATCAT CGGCCTGCCA CCATTCGGCG GCGCCTGGAG CAAGTGGTAT
CTCATGCTTT CCGCCGCTGA GGCAGAGCAT CTCATTATCA TCGGCGTGCT GATGGTGAGT
TCGCTGCTGA ATGTCGCCTA TCTTTTGCCG GTAGCCGCCC GTGCCTTCTT CGCTCCACCA
AAAGGTGGTG TCGCTCATTC ACTTGGCGCA GCCGCTTCTC CGCAGGGGGG CCTCGCGGAA
GCACCTGCCT TGTGTGTCGT ACCCCTCTGC ATAACGGCGA TAGGCTGCAT CTTTCTCTTC
TTCACCGTGA ACGGATTGTA CGAGTTCCTG CTTCACGTCC CGATTTTGCC GGAGAGTGCG
CCATGA
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| Protein sequence | MTDTTALLIA LGLPAAATFM IAALGSRPNL RDATSVIASL LTFAVVLYLL NGFLDGARPS
ITLFEVMPGL VVNFAIEPLG MLFATVASGL WIVTAIYSIG YMRGAGEKKQ TRFYICFAIA
ISAALGIAFS GNLFTLFIFY EVLTISTYPL VAHKETPEAR RGARIYLAIL MTTSILFLLV
AVIWTWNLAG TMDFRPGGIL EGRIDPAYVP LLLALFAFGI GKAALMPFHR WLPAAMVAPT
PVSALLHAVA VVKAGVFTML KVGTYIFGVG FLSRTGAAEW LVWLAAASIL IASIIALTKD
DLKERLAYST VSQLSYITLG MALANQMGVV GGGMHIVMHA MGKITLFMCA GAIYVAAHKT
KVSELDGLGR KMPFTFIAFT LASLSIIGLP PFGGAWSKWY LMLSAAEAEH LIIIGVLMVS
SLLNVAYLLP VAARAFFAPP KGGVAHSLGA AASPQGGLAE APALCVVPLC ITAIGCIFLF
FTVNGLYEFL LHVPILPESA P
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