Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2937 |
Symbol | rplM |
ID | 5455926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 3135530 |
End bp | 3136093 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640878520 |
Product | 50S ribosomal protein L13 |
Protein accession | YP_001414201 |
Protein GI | 154253377 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0102] Ribosomal protein L13 |
TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.000493547 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGTTGA CAGGGGCCCA AGGCTCGCCT AAAAGCAGCG CCGAACCGGG GGCCCGAGCG TGGCCCCTCT CTATTTGCAG TTTCGCCAGG ATTTTTCGCA TGAAGACCTA TTCCGCGAAA GCCGCCGAAA TCGAGAAGAA GTGGATCGTG ATCGATGCCG AAGGCATCGT GGTCGGCCGT CTCGCGTCCT ATGTCGCCAA TATCCTGCGC GGCAAGCACA AGACGACCTA TACGCCCCAT CTCGATTGCG GCGACAACGT CATCATCGTG AACGCCGCCA AGGTGCAGTT CACGGGCGCG AAGTACGATG ACAAGCGCTA CTACCGCCAC ACGGGCCACC CGGGCGGCAT CAAGGAAACG AGCCCGAAGC GCATTCTCGA AGGCCGTTTC CCCGAGCGCG TGCTCGAACT CGCCGTGAAG CGCATGATCC CGCGCGGACC GCTTGGCCGC AAGCAGATGG GCAATCTGCA CATCTATGGC GGCGCCGAGC ATCCGCATGA GGCGCAGCAG CCGAAGAAGA TCGACTTCGC CGCCTTGAAC CGCAAGAACG TCAGGATCGC ATAG
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Protein sequence | MTLTGAQGSP KSSAEPGARA WPLSICSFAR IFRMKTYSAK AAEIEKKWIV IDAEGIVVGR LASYVANILR GKHKTTYTPH LDCGDNVIIV NAAKVQFTGA KYDDKRYYRH TGHPGGIKET SPKRILEGRF PERVLELAVK RMIPRGPLGR KQMGNLHIYG GAEHPHEAQQ PKKIDFAALN RKNVRIA
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