Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2936 |
Symbol | |
ID | 5456249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 3134896 |
End bp | 3135333 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640878519 |
Product | thioesterase superfamily protein |
Protein accession | YP_001414200 |
Protein GI | 154253376 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.00119328 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCGATC TGGTGCCGGT GATGAGCGTG GGCGAGCTTG AGGCGTTCAT GGAGCGCGAG TTTCCGCAGA TGCGGATGGG GGCGGACACG ACGCGGATCG AGGCGGTGGG GCCGGGGACG GCGGTACTGC GGCTCGGCTT TTCGGAGCGG AACCTACGGC CGGGCGGCAC GATTTCGGGG CCCGCCATGA TGGCGCTGGC GGATTATGCA ATGTATGCGG CGGTGCTGGC GCATATCGGG CCGGTGGGGC TGGCGGTCAC GACCAACCTG TCCATCAACT TCCTCAGGAA GCCCGGACCC GCCGACATCA TTGGCGAGGC GCGGCTTCTG AAGCTCGGGC GGGCACTCGC CGTCGGCGAG ATTGCGATGT GGCAGGATGG GGCGGAGGAC GCGCCGGTCG CCCATGCCGT TTCGACTTAT TCCATTCCGC CGAAGTGA
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Protein sequence | MADLVPVMSV GELEAFMERE FPQMRMGADT TRIEAVGPGT AVLRLGFSER NLRPGGTISG PAMMALADYA MYAAVLAHIG PVGLAVTTNL SINFLRKPGP ADIIGEARLL KLGRALAVGE IAMWQDGAED APVAHAVSTY SIPPK
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