Gene Plav_2936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2936 
Symbol 
ID5456249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3134896 
End bp3135333 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content67% 
IMG OID640878519 
Productthioesterase superfamily protein 
Protein accessionYP_001414200 
Protein GI154253376 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.00119328 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCGATC TGGTGCCGGT GATGAGCGTG GGCGAGCTTG AGGCGTTCAT GGAGCGCGAG 
TTTCCGCAGA TGCGGATGGG GGCGGACACG ACGCGGATCG AGGCGGTGGG GCCGGGGACG
GCGGTACTGC GGCTCGGCTT TTCGGAGCGG AACCTACGGC CGGGCGGCAC GATTTCGGGG
CCCGCCATGA TGGCGCTGGC GGATTATGCA ATGTATGCGG CGGTGCTGGC GCATATCGGG
CCGGTGGGGC TGGCGGTCAC GACCAACCTG TCCATCAACT TCCTCAGGAA GCCCGGACCC
GCCGACATCA TTGGCGAGGC GCGGCTTCTG AAGCTCGGGC GGGCACTCGC CGTCGGCGAG
ATTGCGATGT GGCAGGATGG GGCGGAGGAC GCGCCGGTCG CCCATGCCGT TTCGACTTAT
TCCATTCCGC CGAAGTGA
 
Protein sequence
MADLVPVMSV GELEAFMERE FPQMRMGADT TRIEAVGPGT AVLRLGFSER NLRPGGTISG 
PAMMALADYA MYAAVLAHIG PVGLAVTTNL SINFLRKPGP ADIIGEARLL KLGRALAVGE
IAMWQDGAED APVAHAVSTY SIPPK