| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2927 |
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| Symbol | |
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| ID | 5455659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3126716 |
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| End bp | 3127750 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640878510 |
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| Product | cytochrome oxidase assembly |
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| Protein accession | YP_001414191 |
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| Protein GI | 154253367 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1612] Uncharacterized protein required for cytochrome oxidase assembly |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0000548442 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.000233387 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATATTC TTCCCCGGAT CAATGCCATC GAAAAGACCG ACGCGAACCA TCACGCGATT
GCATGGTGGC TGATCGGCGT CGCGGCGCTG GTCTTCATCA TGGTGGTGGT GGGGGGGCTC
ACGCGGCTCA CCGAAAGCGG CTTGTCGATC ACCGAATGGA AGCCGGTGAC GGGTGCGCTG
CCGCCGATGA CGGAAGAGCA CTGGCAGGAG GAGTTCGACC TCTACCGGCA GATCCCGCAA
TACCAGCTCG TCAACAAGGG CATGTCGCTC GACGAGTTCA AGACGATCTA CTGGTGGGAG
TGGAGCCACC GCTTTCTCGG AAGGCTGATC GGGCTTGCGT TTTTCGTGCC GTTCGTTTTT
TTTGTCGTGA CGCGGCGCGT TGAGCGGGCG CTGGTGCCGC GGCTGATTTT CCTGTTCGTG
CTGGGCGGCA TGCAGGGCGT GCTCGGCTGG TGGATGGTGA TGAGCGGGCT CACCGACCGG
ACGGAGGTGA GCCAGTACCG GCTGGCGGCG CATCTCGGTC TTGCGACGCT GATCTTCGGG
GCGCTGATCT GGACGGCGCT CGATCTGCTG AACGGCAAGA GCACGCGGCT GTTGACGGGC
CTGGCGAAAG CGGCGGCGGC GATCCTTGCG TTGATCTTCC TGCAGACGAT CCTCGGCGCG
TTTGTCGCCG GCATAAGGGC GGGGCTGATC TACAACACCT GGCCGCTGAT GGCGGGGGCG
TTCATTCCCG ACGGGCTCTT CGCGATGACG CCCGTCTGGC ATAATTTTTT CGAGAGCCAT
CTCACGGTGC AGTTCCAGCA CCGGATGACG GCTTACCTGC TTTTGCTCTG CGTCGTGTGG
CACTGGTGGG CGGCGCGCAA GACGGCAGCG GCTCCGAGCG CGGGGTGGCT TGCGGTTGCG
ACTTTCGCGC AGGCCTGCAT CGGCATCTGG ACGGTGCTCT GGGTGGTGCC GATCCCGCTT
GGCGCGGCGC ATCAGGCGGG GGCGATGGTG GTGTTCGGCG TTGCCGTGTG GCATGTGCAC
CGGCTGGCGA AGTAA
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| Protein sequence | MNILPRINAI EKTDANHHAI AWWLIGVAAL VFIMVVVGGL TRLTESGLSI TEWKPVTGAL
PPMTEEHWQE EFDLYRQIPQ YQLVNKGMSL DEFKTIYWWE WSHRFLGRLI GLAFFVPFVF
FVVTRRVERA LVPRLIFLFV LGGMQGVLGW WMVMSGLTDR TEVSQYRLAA HLGLATLIFG
ALIWTALDLL NGKSTRLLTG LAKAAAAILA LIFLQTILGA FVAGIRAGLI YNTWPLMAGA
FIPDGLFAMT PVWHNFFESH LTVQFQHRMT AYLLLLCVVW HWWAARKTAA APSAGWLAVA
TFAQACIGIW TVLWVVPIPL GAAHQAGAMV VFGVAVWHVH RLAK
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