| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2876 |
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| Symbol | |
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| ID | 5453780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3079286 |
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| End bp | 3079990 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640878458 |
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| Product | DNA repair protein RecO |
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| Protein accession | YP_001414140 |
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| Protein GI | 154253316 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
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| TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.00379207 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTTGTCGG CGCGGGCTCA TGGCGAGACG GGCGCGATCC TGGAGCTTTT CACGCGGGAG
CAGGGGCGGC ATCTCGGGCT TGTGCATGGC GGCGCGGGGC GGCGGATGCG GAGCGTGCTG
CAGCCGGGCA ACAAGCTGGC GGCGCATTGG CGGGGGCGGC TTTCCGAACA TCTCGGCACC
TATCAGGTGG AGCTGGTGAA GCCGCTGGCG GGGCTTTTGA TGGACGATCC GCTGGCGCTG
CTGGGCCTGA GCGCGGCGAG CGCCATTTGC AGCATCCTGC CGGAACGGGA GGCGCATCCG
GCACTTTACG ACGGCTATGA AGTGCTGCTC GACACGATGC GGGACGAGGA TGTGTGGCCG
GCGGTGTTTG TGCGCTGGGA GCTGGGGCTT TTGCAAGAGC TGGGCTTCGG GCTCGACCTC
ACGCAATGCG CGGCGACGGG AAGCCGCGAC GATCTCGCCT ATGTGTCGCC GCGGAGCGGG
AGCGCGGTGA GCCGGGGGGC GGGCGAAATC TACAAGGAGC GGCTCTTCCG GCTGCCGGGC
TTTCTGGTGG GGAGCCAGGC GGGCGCGGCG GAGGCGGCGG ATGTGGCGGA AGGCCTGCGG
CTGACGGGAC ATTTTCTGGA GCGGCATCTC TTCGCGGCGC ATGAGCGGCA CCTGCCGGAT
GCGCGGATCA GGCTCATGGA GAAGATGGCG GCGAGGGCGG AGTGA
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| Protein sequence | MLSARAHGET GAILELFTRE QGRHLGLVHG GAGRRMRSVL QPGNKLAAHW RGRLSEHLGT
YQVELVKPLA GLLMDDPLAL LGLSAASAIC SILPEREAHP ALYDGYEVLL DTMRDEDVWP
AVFVRWELGL LQELGFGLDL TQCAATGSRD DLAYVSPRSG SAVSRGAGEI YKERLFRLPG
FLVGSQAGAA EAADVAEGLR LTGHFLERHL FAAHERHLPD ARIRLMEKMA ARAE
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