| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2874 |
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| Symbol | |
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| ID | 5454828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3077497 |
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| End bp | 3078177 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640878456 |
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| Product | ribonuclease III |
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| Protein accession | YP_001414138 |
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| Protein GI | 154253314 |
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| COG category | [K] Transcription |
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| COG ID | [COG0571] dsRNA-specific ribonuclease |
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| TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.00509584 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGGTCGAT TGAACGCCGC GCTTCAAGTC CGTTTAGCCC ATGATTTCAA GGACTTGGGG
CTTCTTTCTC GGGCGCTCAC TCATCCAAGC GCGGATGGCG CGAACTACCA GCGATTTGAA
TTTCTCGGCG ACCGCGTGCT CGGTCTCGTC ATCGCGGACT GGCTGCTGCG CGATTTTCCG
CAGGCGGATG AAGGCGAATT AGCCATTCGT TACAACGCGT TAGTCCGAAA GGAAGCCTGC
GCGGAGGTGG CGGAACGGAT CGGCCTCGGC GCCTGCATCA CCATGGGTGC GGGCGAGGAA
AAAGCCGGCG GAAGGCGGAA ACCCGCCATT CTTGCCGATG CCTGCGAGGC GGTGATCGCG
GCGCTCTATA CCGATGGCGG ACTACAGGCG GCGCGGCGGT TCATCGAGAC GGAATGGGCC
TATCTCGTTG AAAAGTCTAG CGAAATTCCG CAGGACGCGA AGACCGCATT GCAGGAATGG
GCGCAGGCGC GCGGGCAAGG CGTGCCGACA TATACGCTGG TCGGCAGAAG CGGGCCGGAC
CACGCACCGG AATTCACGGT CGAGGTCTCG GCCGGCAAGG CCAAGCCCTT GAGGGCACAA
GGAAATTCCA AACGGCAGGC AGAGCAAACG GCCGCTCGCG CGCTGCTTGA AGCACTGGGC
GTATGGCCCG CGAAGGACTG A
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| Protein sequence | MGRLNAALQV RLAHDFKDLG LLSRALTHPS ADGANYQRFE FLGDRVLGLV IADWLLRDFP
QADEGELAIR YNALVRKEAC AEVAERIGLG ACITMGAGEE KAGGRRKPAI LADACEAVIA
ALYTDGGLQA ARRFIETEWA YLVEKSSEIP QDAKTALQEW AQARGQGVPT YTLVGRSGPD
HAPEFTVEVS AGKAKPLRAQ GNSKRQAEQT AARALLEALG VWPAKD
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