Gene Plav_2872 details

Gene Information

• Locus tag: Plav_2872
• ID: 5454208
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Parvibaculum lavamentivorans DS-1
• Kingdom: Bacteria
• Replicon accession: NC_009719
• Strand: +
• Start bp: 3076263
• End bp: 3076664
• Gene Length: 402 bp
• Protein Length: 133 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640878454
• Product: holo-acyl-carrier-protein synthase
• Protein accession: YP_001414136
• Protein GI: 154253312
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0736] Phosphopantetheinyl transferase (holo-ACP synthase)
• TIGRFAM ID: [TIGR00516] holo-[acyl-carrier-protein] synthase; [TIGR00556] phosphopantethiene--protein transferase domain

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 41
• Fosmid unclonability p-value: 0.0141678
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATTATCG GTATCGGCAA CGACATCATC GATATCCGCC GGGTTCAGAA GACGCTGGAC 
CGTTTCGGCG ACCGTTTCAT CGAGCGGATA TTCACCGAGG TCGAGAAGGC GAAGTCGGAA 
GGGCGGCGGA TGCGGGCGGC CTCTTATGCC AAGAGGTTTG CGGCGAAAGA GGCCTGCTCC 
AAGGCGCTCG GGACCGGGAT GCGGCGCGGC GTTTTCTGGA AGGATATGGG GGTCGTGAAC 
CTGCGGGGCG GGCAGCCGAC CATGGCGCTG ACAGGGGGCG CCCTGGAGCG GCTGAAGGAG 
ATGACGCCGG AGGGCACGGA GGCCGTCATT CACCTGACGA TTACCGACGA TCACCCGCAG 
GCGCAGGCTT TCGTCATTAT TTCGGTGGTG CCCAAGCCCT GA 

 

Protein sequence

MIIGIGNDII DIRRVQKTLD RFGDRFIERI FTEVEKAKSE GRRMRAASYA KRFAAKEACS 
KALGTGMRRG VFWKDMGVVN LRGGQPTMAL TGGALERLKE MTPEGTEAVI HLTITDDHPQ 
AQAFVIISVV PKP