| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2864 |
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| Symbol | |
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| ID | 5454379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3069374 |
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| End bp | 3070045 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640878446 |
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| Product | uracil-DNA glycosylase superfamily protein |
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| Protein accession | YP_001414128 |
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| Protein GI | 154253304 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1573] Uracil-DNA glycosylase |
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| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.48935 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.109916 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGCCCCCT CCTCAGGTCT GTCGGCGACC ATCCCTGAAG CGCCGCTCGA CTGCCCGCTC
TGCCCGCGTC TCGTTGCCTA TCGGCAAGAC AATGACAGGG CGCACCCGGA CTGGTTCAAC
GCGCCTGTCC CATCCTTCGG CACCGGCAAT GCTCGCCTGC TGATTGTCGG CCTGGCGCCG
GGCGTTCAGG GAGCGAACCG TACCGGCCGG CCTTTCACGG GCGACTATGC GGGCGATCTC
CTCTACGCCA CGCTGCTCGA ATTCGGCTTC GCGCGCGGCA CCTACGACGC CCGCCCCGAT
GACGGGCTCG AGCTGGTCGG CGCGATGATT ACCAATGCCG TGCGGTGCGT GCCGCCGCAA
AACAAGCCGA CGCCCGCCGA GGCCAAAACC TGTCTTCGGT TCCTGTCTGC CCGCATTGAG
GCCCTGCCGG ACCTTCAGGC CGTTCTGGCC CTCGGACGCA TCGCCCACGA CGCGGTGCTC
TCGGCGCGGG AGTTGAAACG CTCATCCGCA CCATTCGGCC ACGGCGCGCA ACACGATCTC
GGGCAGGGTT TAAGGCTTTT CGACAGCTAT CATTGCTCTC GATACAACAC GAATACGCGG
CGTCTCACAC CGGATATGTT TCGGAGCGTC TTCAGCGATG TCAGGGCCTA TCTCGACGGC
AAGGGCCGCT AG
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| Protein sequence | MAPSSGLSAT IPEAPLDCPL CPRLVAYRQD NDRAHPDWFN APVPSFGTGN ARLLIVGLAP
GVQGANRTGR PFTGDYAGDL LYATLLEFGF ARGTYDARPD DGLELVGAMI TNAVRCVPPQ
NKPTPAEAKT CLRFLSARIE ALPDLQAVLA LGRIAHDAVL SARELKRSSA PFGHGAQHDL
GQGLRLFDSY HCSRYNTNTR RLTPDMFRSV FSDVRAYLDG KGR
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