| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2805 |
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| Symbol | |
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| ID | 5453863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3009195 |
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| End bp | 3009905 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640878387 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001414070 |
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| Protein GI | 154253246 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.726204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.387546 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAACAG GAACCGGCGA TGGCGCGGGA TCATCCGCCT TCAACGACGC CAGATTTCCC
TCCGATCCGC AGACGGAACG TTTCCGCCAG AGTCTCGCCG CCGCACAGCG CAACCCGACC
ACCAGGCATC TTCTGTCGCG CGCCCTCGCC TATGCCGATG AAAGCGAAAC CCGCATCGTC
GAGCTCACCG CGCGCATCCG GCAGCTGGAA GCTCTCGCCC ATACAGATGA ACTGACGGGC
CTTCTCAATC GCCGCGGTTT CGACGATGTC CTGCGCCGCA ACCTGCTGAG CGCCGCGCGT
TATGAAGAAG CGGGACTTTT TGCCTATATC GATCTCAACG ACTTCAAGTC GATCAATGAT
CGCTACGGCC ATACGGCCGG CGACGAGGTT CTCCGCGCCG TCGGCTCATT CCTCAGCCGC
AGCATCCGCG CCACGGACTA TGCGGCCCGC CTCGGCGGCG ACGAATTTGC CATCCTCTTC
GTCCGCGCGG ACCACAAACG CGCCCGCGAA CGGGCCCGCG AAATGCTGCG GGGCATCGCC
GACCTTGAGA TATCCTGCAA ATCGCACCGA ATTTCCGTCA CGGCCAGCCT GGGTCTTGCC
AGTTACAATG GCGAAACCTG CCAGGCGGAC CTGATCGAAC GGGCCGACCG CGCCATGTAT
GCGGATAAAA AAAGCGGTGG CCGCGCCATG CGTTTGACGA CGCACGGCTG A
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| Protein sequence | MGTGTGDGAG SSAFNDARFP SDPQTERFRQ SLAAAQRNPT TRHLLSRALA YADESETRIV
ELTARIRQLE ALAHTDELTG LLNRRGFDDV LRRNLLSAAR YEEAGLFAYI DLNDFKSIND
RYGHTAGDEV LRAVGSFLSR SIRATDYAAR LGGDEFAILF VRADHKRARE RAREMLRGIA
DLEISCKSHR ISVTASLGLA SYNGETCQAD LIERADRAMY ADKKSGGRAM RLTTHG
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