| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2793 |
|---|
| Symbol | |
|---|
| ID | 5453743 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 2994932 |
|---|
| End bp | 2996326 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640878375 |
|---|
| Product | aldehyde dehydrogenase |
|---|
| Protein accession | YP_001414058 |
|---|
| Protein GI | 154253234 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.145836 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.229577 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAGA CGCTGAAAGT AATCTCCCCC GTTGACGGGA GCGTGTATGC CGAAAGGCCC
CTCGCAGATT GGGCGGAAGT TGACGGAGCG CTTGGCACCG CCAAGGCGGC TCAAGCCGCA
TGGAAGCTGG TGCCGATAGC GGAACGCGCA TCTCTATGCC TGCGCTTCAT CGAAGCATTT
CTCGCCATGA AAGACGAGAT CGTGCCTGAA CTCGCCTGGC AAATGGGACG GCCCATCGCT
TACGGAGCGG GTGAACTGCG TGGCTTTGAA GAGCGAGCCC GCTACATGAT TGCGATAGCT
GGCGATGCCC TGGCAGACAT CGACGCAGGT CCCAAGGAAG GCTTTCGCCG CTGGGTCCGA
CGCGAGCCCA TCGGCACTGT TCTCGCAATA GCGGCGTGGA ACTACCCCTA TCTGATTGCG
GTCAATTCGG TTGTGCCCGC GCTGATGGCC GGCAATTCGG TGATCTTGAA ACATTCGGGC
CAAACGCCGC TCTGCGCCGA ACGTTTTGCC ATGGCATTCG AGAAAGCAGG CGCCCCCGAT
GGGCTGTTTC AAGTTCTCCA TATGAGCCAC GATATGACCG AGAAGGCGAT TGCCGACCCC
CGGGTCGACT TCGTCAACTT CACGGGTTCC GTATCGGGCG GACATGCGGT GGTTCACGCT
GCAAAGGATC GCTTTATCGG CATCGGGCTG GAATTGGGTG GAAAAGATCC AGCCTATGTA
CGGGCGGACG CAAACCTGCC CTTCGCTATC GAGAACCTGG TCGACGGCGC TTATTTCAAC
TCCGGCCAGT CCTGCTGCGG CAAGGAACGG CTATATGTTC ATGCCGACGT CTACGACGAT
TTTGTCGAAG GATTCGTTGA TCTTACAAAG AAGTACAAGC TCGGCAGTCC GCTCGACGCG
GATACGACGA TCGGCCCCAT GGTGCGCGCT TCCTCGGCAG CCTTCGTACG GGGCCAAATC
GAACAGGCAA AGCGCGCCGG TGCACGCGCC CTTGTCGGCG AAGCGCATTT TCCCGCTTCG
AAGCCCGGCA CCCCATATCT CGGTCCGGAA GTGCTGGTAG ACGTGAACCA TCAGATGGAC
GTGATGCGGG AAGAGACATT CGGTCCTGTG ATCGGCATCA TGAAGGTGAC TTCGGACGAA
GAAGCCATCG GCCTCATGAA CGACAGCCCC TACGGGCTGA CAGCTTCGGT CTGGACTGAA
GACGAAGAGG CGGGTGAGAA AATCGGTGAG CGCGTCGAGA CGGGCACCTT CTTCCTCAAT
CGCTGTGACT ATCTTGATCC AGCCCTAGCC TGGACCGGCG TAAAAGACAC GGGACGCGGT
GCGACGCTTT CCCGTGTTGG CTATGAATAT TTGACGCGTC CCAAAAGCTA TCACCTGAGA
ACCAGAACAA AATGA
|
|---|
| Protein sequence | MTETLKVISP VDGSVYAERP LADWAEVDGA LGTAKAAQAA WKLVPIAERA SLCLRFIEAF
LAMKDEIVPE LAWQMGRPIA YGAGELRGFE ERARYMIAIA GDALADIDAG PKEGFRRWVR
REPIGTVLAI AAWNYPYLIA VNSVVPALMA GNSVILKHSG QTPLCAERFA MAFEKAGAPD
GLFQVLHMSH DMTEKAIADP RVDFVNFTGS VSGGHAVVHA AKDRFIGIGL ELGGKDPAYV
RADANLPFAI ENLVDGAYFN SGQSCCGKER LYVHADVYDD FVEGFVDLTK KYKLGSPLDA
DTTIGPMVRA SSAAFVRGQI EQAKRAGARA LVGEAHFPAS KPGTPYLGPE VLVDVNHQMD
VMREETFGPV IGIMKVTSDE EAIGLMNDSP YGLTASVWTE DEEAGEKIGE RVETGTFFLN
RCDYLDPALA WTGVKDTGRG ATLSRVGYEY LTRPKSYHLR TRTK
|
|---|
| |